Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3388 |
Symbol | |
ID | 7311952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3929305 |
End bp | 3930096 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610292 |
Product | beta-lactamase domain protein |
Protein accession | YP_002507656 |
Protein GI | 220930747 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGT TTTGCAGTTT ATATAGCGGA AGCAGTGGAA ATGCACTTTT TATAGGTACA GAAAAAACAA AGATTCTTAT AGATGCCGGC TTAAGCGGTA AAAAAATACT TGAGGCACTG TGTTCCATTG GTGAAAAACC GGAGGAATTA AGTGCTATAT TAATTTCCCA CGAACATGTT GACCATGTAA GGGGTGCCGG AATTCTTTCA AGAAAAGTGG ACATTCCCAT ATATGCGAAT GAGTCTACCT GGTGTGCGAT GGAAAATGGT ATCGGGCCTG TAAAACTTGA AAACAAAGTA GCATTCAGTA CAGGTGAAGA GTTTGAAATC GGGGATATAT GTATAAGGCC ATTTGCGATT CCTCATGATG CAGCAGAACC CGTGGGTTTT AACTTCTTCG CAGACGGTAA AAGGATTACA ACAGCTACTG ATATTGGCCA TATGAGTGAT GAACTTCTTG ACTCTATCGT CGGAAATGAT TTGGTTTTAC TGGAGTCCAA TCATGATATA GAAATGCTAA AGGTAGGCCC TTACCCATGG CCTTTGAAAA AAAGGATTCT GGGAGACCAT GGACACTTGT CAAATGAGAA TGCGGCGAAG GTAATTACAT ATCTTGCTGA AAAAGGTTGC AGTCGTTTTA TTTTAGGTCA TTTGAGCAGT GAAAACAACT TCCCGGAGCT TGCTTATCAG ACAACATATA ATGCATTGAA TGAAAAGAAA ATAGCGGTAG GCAGTGACGT TGAGCTTGAG GTTGCCCTAA GAGACAGGGT AGGACATATA AATAAAATAT AA
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Protein sequence | MVKFCSLYSG SSGNALFIGT EKTKILIDAG LSGKKILEAL CSIGEKPEEL SAILISHEHV DHVRGAGILS RKVDIPIYAN ESTWCAMENG IGPVKLENKV AFSTGEEFEI GDICIRPFAI PHDAAEPVGF NFFADGKRIT TATDIGHMSD ELLDSIVGND LVLLESNHDI EMLKVGPYPW PLKKRILGDH GHLSNENAAK VITYLAEKGC SRFILGHLSS ENNFPELAYQ TTYNALNEKK IAVGSDVELE VALRDRVGHI NKI
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