Gene Ccel_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3319 
Symbol 
ID7311891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3862595 
End bp3863239 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content38% 
IMG OID643610222 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_002507588 
Protein GI220930679 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02859] RNA polymerase sigma-H factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.96723e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAACAA ACTTAAAGGC TGAGGTCTAT CAAACATATT CTGGTATGGT TGACGAAGAT 
GTAATATTAG AAGCTAAAGC TGGTAATACA ATGGCTCTTG AATATCTCAT AAACAAGTAC
AAAAGCTTTG TCCGGGCAAA AGCCAGAACA TACTTTCTTA TAGGTGCTGA CAGAGAAGAT
ATCATTCAAG AAGGTATGAT TGGATTGTTT AAGGCGATCC GAGATTATAA GGGGGACAAG
CTTTCATCCT TCAGAGCGTT TGCGGAACTC TGCATTACCA GACAAATAAT TACTGCTATT
AAAACCGCTA CCAGACAGAA ACATATTCCG CTAAATTCAT ACGTTTCTTT AAATAAGCCC
ATTTTTGACG AAGAATCTGA CCGTACCTTG ATGGATATAA TCAGTGAGGA GAGTATAAGT
GATCCGGAAG AACTGATTAT AAACAGGGAA GAGTTCAAAG GTATAGAAAG TAAGATGGGT
GAAATTTTGA GTTCTCTTGA ATGGGAAGTA CTGACTTCAT ATTTGGATGG CAAGTCCTAC
CAAGAGATTG CCGAGGATTT GGATAGACAT GTAAAATCTA TCGACAACGC GTTACAGCGT
GTAAAACGTA AGTTAGAGAA ATATCTAGAA GAACAAAAAG CCTAA
 
Protein sequence
MKTNLKAEVY QTYSGMVDED VILEAKAGNT MALEYLINKY KSFVRAKART YFLIGADRED 
IIQEGMIGLF KAIRDYKGDK LSSFRAFAEL CITRQIITAI KTATRQKHIP LNSYVSLNKP
IFDEESDRTL MDIISEESIS DPEELIINRE EFKGIESKMG EILSSLEWEV LTSYLDGKSY
QEIAEDLDRH VKSIDNALQR VKRKLEKYLE EQKA