Gene Ccel_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_3318 
Symbol 
ID7311888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3860960 
End bp3862231 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content37% 
IMG OID643610219 
Productintegrase family protein 
Protein accessionYP_002507587 
Protein GI220930678 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.885e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GTAATGATGA TACTTCTCAG AAGAAAAAAA CTCGTCGTGC CAGAAACGAA 
GGTTCTGTTC GCTGGATAGA AGAAAAGCAA TTATGGCAAG CCCGTTATCC TATTGGTTTA
AAAGAAACAA TAGATAAAAA TGGTAAACCC TGTTGTAAGA CTGTTTACAA AAGTATCTAC
GGAAAAAAGA AAACTGGTCC AGGTGGAGTA ATGGCTGAGA TGAGAAACGC ACTAGCTGCA
CTCGGAAAAG GAACTTATAT TGATCCGTCA GATAAAACAC TTATCGTCTG GTGCCAAGAA
TGGTATGAGA CTTACAAAGA GCCCAAGTTA AAAACAAATA CGCGTCTTAA ATACGAAACC
TCAATTACTA GATTAAAACG ATATAGTATT GCCGATATGC AGTTAAAGAA CCTAAGCCTT
GAACTAATTC AAAAAGATTA CAACAGAATG GCCAAAGATG GATTAAGCGA AGAAACTATT
AAAGCCACCC ACAGTCTAGT AAATGGGGCA CTAGAAAAAG CCGAAGCTTT AAATAAAATT
AATAAGAATC CTGCTCGCCA TGTTACTATA CCAAGGACTG ATGAAGATGA CGCTGAAGAA
AGTAATACTA AGGCTTTAAA CGACACCCAA TTAGACGCCT TTCTTTATCA GATCGGTCGA
CGTAGTAAAT ATTTTATGTA TGCTTTTTTT ATGCTTAATA CTGGTTTGAG ACCCGGTGAA
GCTTTGGCTT TAACTCGTTC TGATATTGAC TTTACTACTA ATAAGATTAA AGTTACAAAA
ACATATATCG AAAAATTAAA GAAGGTCCAA AACAGTACAA AAACAGCTTC CAGTAGACGC
AAGGTACCCA TACCAAGCGA AATGATAAGT TTGCTTAAAG AGTATATGTT GCAGCAACCG
AAAAAGGAGC CTACCGACCC TTTATTTCAG ACAGCCACCG GGAAAAGGCC GTCTCAGGGA
TATTTGCGTA AACGATTTAA ATATGCTGGT GCCTCTGCTG GATGTGAATG GGTAAATCTA
CACACTATGC GTCACACATT TGCATCCAGA TTATTTAAAA AGAAAGTCGA TATTAAGGTT
ATCAGTGAAT TATTAGGCCA TAAAGATGTT TCAACAACTT ATGACATATA TGTACATTTC
ATTGATAATA TAGTGGAGGA GTCTGTCCAG GTATTAAATT CGGATATCCC TGAAAATCTT
CCAACTAAGA GCAGAAAAGG TGAAAAGAAA GCCAAAAAGG TGATAGATAT CAAAAAAGTT
AGTAGCCATT AA
 
Protein sequence
MQKSNDDTSQ KKKTRRARNE GSVRWIEEKQ LWQARYPIGL KETIDKNGKP CCKTVYKSIY 
GKKKTGPGGV MAEMRNALAA LGKGTYIDPS DKTLIVWCQE WYETYKEPKL KTNTRLKYET
SITRLKRYSI ADMQLKNLSL ELIQKDYNRM AKDGLSEETI KATHSLVNGA LEKAEALNKI
NKNPARHVTI PRTDEDDAEE SNTKALNDTQ LDAFLYQIGR RSKYFMYAFF MLNTGLRPGE
ALALTRSDID FTTNKIKVTK TYIEKLKKVQ NSTKTASSRR KVPIPSEMIS LLKEYMLQQP
KKEPTDPLFQ TATGKRPSQG YLRKRFKYAG ASAGCEWVNL HTMRHTFASR LFKKKVDIKV
ISELLGHKDV STTYDIYVHF IDNIVEESVQ VLNSDIPENL PTKSRKGEKK AKKVIDIKKV
SSH