Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3249 |
Symbol | |
ID | 7311827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3802738 |
End bp | 3804333 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643610150 |
Product | two component transcriptional regulator, AraC family |
Protein accession | YP_002507518 |
Protein GI | 220930609 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAACG TAATGATTGT TGATGATGAA CCGGTAATAA AGCAAGGACT TTTATGCTTT GTCAATTGGG AGGCCCTTGA TTGCAAAGTG ATTTGTGATG CAGAAAACGG GATAGATGCA ATGGAAAAAC TGGCTGTCCA TCCCGTGAAT ATCGTCCTTA CAGATATTAA AATGCCTGGA ATGGATGGCT TGGAATTGTC AAAACTCATT TACGAAAAGT ATCCTTCTAT AAAAGTCATT ATTCTTACGG CCTTTTCAGA CTTTACCTAT GCACAAGCTG CAATTAAATA CAATGTATTG GATTTTGTCA TCAAGACCAA CCCAACTGAA AAAATTCCGG ATGCCATTCG TAAAGCAAAG GACCTAATTG CACAGGAGAA AGAAAAAGAA GAAAAGCTGA AGCTTATGGA AGAAAAGGCA ATTCTGAGGC TGTCAGAGAT CAAGGAAAAT TTTTTCAAAG ATGTGTTTAA TGGAATCATA GTGAATGATA CCCTTCTTCA AAGCAAGCTA ATTGAGCTTG AAATAAGTAT CGAAAACTAT TTTGTTGTTT TATTTGACAT TCACAATGCT TCAAACGGAG ATTCATCAAT CAGTCCTGAG GACTATAATA AATTCATACA TTCAGTGAAC AATCTTCTTA ATATGGCATT TAAGAGCTAT CCTCACTATA CTGTGGCAAT GGACAGAAAT CTCCTTGTGG CCGTAATTTC CTTCAAGAAC TACAATGTCC CTGTATGTAC TCAAACACTG CTGATGACCT GCAATGAAAT TCTATCCATG GCAGACAGCT TCATGCGGTT TACTATCAGT ATAGGGTTGA GCCAAATGCA CCAAAAGGTC CAGGCTCTAT CTGTTGCCTA CCAGGAGGCC AGGGAAGCAT TGAGAGGTGG ATTTTATAAT AACAACCACG TTTCTGTTTT CGTGCCCCGT ACTCCGCCCA TACCATCCTT AATAAATCAA CCCCACTATA TTGCCGACAA AATTGTAGGC AGCCTCAAAT TGGAAAACCC CTCAGAGGCA ATTATAAGCC TTGAAAACCT ATTGGAGGAG TACAGGAGTA ATAAGGAACC TATTGAAAAT ATCAAGGTTT CGTGCATGCT CATCGCCTCT TATTGTTACA GGCTTGTTGC GAGCTATAAG CTGTTTGCTC CGGAACTTGC CGATAGCGAG CCCGAGGTAT ACAAGCAGAT ACAGTCTAGC AGAAATATCC AAAATCTATT AAATATTTTA AGGCAGTTAG TAGAGAATGT TTCACAGGTT GTGGAAAATA ACGGGAATAA ATTCAGTTGC TTGGTAAAGG AAACCCAAAA GTATATTCGC GATAATTATA ACAAGAATAT CAGCCTCCAG TCCATAGCTG ACCACATCCA TGTCAACAGC AGCTATCTTA GCCGGTTGTA TAAAAAGGAA ACAGGGGAAT CCATCGTGGA TGCCATTAAT AAGTATCGGA TTGAAAACGC CAAAAAGCTT TTAAAAGACC CTGTCTACAA AGTGTTTGAG GTAGCGTGTG CTGTAGGCAT AGAAGACCCT GCCTACTTTA CTCATGTTTT TACCAAATAT ACTGGAATGA GTCCTAAGGA ATACAAGAGT AAATAA
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Protein sequence | MYNVMIVDDE PVIKQGLLCF VNWEALDCKV ICDAENGIDA MEKLAVHPVN IVLTDIKMPG MDGLELSKLI YEKYPSIKVI ILTAFSDFTY AQAAIKYNVL DFVIKTNPTE KIPDAIRKAK DLIAQEKEKE EKLKLMEEKA ILRLSEIKEN FFKDVFNGII VNDTLLQSKL IELEISIENY FVVLFDIHNA SNGDSSISPE DYNKFIHSVN NLLNMAFKSY PHYTVAMDRN LLVAVISFKN YNVPVCTQTL LMTCNEILSM ADSFMRFTIS IGLSQMHQKV QALSVAYQEA REALRGGFYN NNHVSVFVPR TPPIPSLINQ PHYIADKIVG SLKLENPSEA IISLENLLEE YRSNKEPIEN IKVSCMLIAS YCYRLVASYK LFAPELADSE PEVYKQIQSS RNIQNLLNIL RQLVENVSQV VENNGNKFSC LVKETQKYIR DNYNKNISLQ SIADHIHVNS SYLSRLYKKE TGESIVDAIN KYRIENAKKL LKDPVYKVFE VACAVGIEDP AYFTHVFTKY TGMSPKEYKS K
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