| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3177 |
|---|
| Symbol | |
|---|
| ID | 7311764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3703670 |
|---|
| End bp | 3709903 |
|---|
| Gene Length | 6234 bp |
|---|
| Protein Length | 2077 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643610080 |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_002507448 |
|---|
| Protein GI | 220930539 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG4646] DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGTT TCAAAACAAT GTTTAATGAA ACTATGAAGC AGATTACGAG GAATGACAGC
CAGTGGAAAA AGTTTCTAGG TTTCTCAGGA CAGTTATTCA AGTATGGTTT TTACGAAACT
GTCCTTATTT ACAATCAAAG GCCTGATGCA ACTATTGTTG CAGACATGGA TACATGGAAT
AAAAGGGTAG GAAGATGGAT AAATCGTGGC AGCAGGGCAA TTAAGGTTTT TGACCCTGAT
AGTAAAGGTG TACGATATTT ATTTGATATA TCAGATACAC ACGGTAACTA TACAAGTAGA
ATTAACAGCT ACACCATAAA ATCGAATGCT GCTCAAAACT ATATTATGGA ATATCTAGGT
GTAGAAAAAG AAAGGGATTT TGAAGGTTTT GTAGAAAGTC TTTGTACTGA GTTTTTAGAG
AAACATGATT ATCCGGGAGA ATACTTTGAT TGCTTTGTGC AAGATAGTGT TGTATATTCT
GTATTTGACA AGCTTAAATT TGATACTGAA GGAAAATATC ATTTTGAAGA TATTTTGCAA
CAGCTTGATG TTGGACAAGC AACTGAGTAT GCTTCAATAA TATGTGAAAT TAGCAAACAG
GTTTTGAGAC TTTTGGAAAA ACCGGCACGA ATATATAAAA ATAAGGAGAT AAGTAAAAAT
GCGAACCAAA TACATAGAAG GAATTGGACT AGTGGAATAT CCGGAGACAC CGGAGGAAAT
ACAGGTAGCC ATGAACAAAG AGACGGAGAC AATAAAGAAT CAGGAACCGA TATCCAAAGC
GGAGTACAGG GAAGGATCGG AGGGGATACT TTATCCGGTG ATATCACCGG ACGAGAACCC
AGAGTTGGAG GGAATGCCGG AAGGGATATT CGCAGCGGAA GCAGTGAAAT ACTTGGTACA
AAATTACCCG AAGAGAGTGC AGGAAATGAA GATTCAGGGT ATATGGTTCA GTACAATTTA
TCAGGTAGAC ACACAAGCAG TTTTAATGAT GCAAAAGATT CAGGAACAGT TAAAACAGCA
ATATCAGGAA CCCAAAACGG ACAACTACAT GGAACTGGCG AGATATTACA ACTGGATAAG
GGAAACAGCT CAGGAAATAG TGATGAAAGA AGTAGTCAGA ATTCCAAGAT AAAAGAAAAT
AACAGTGGAA AAGATAAAGA GTCATCAGAA AATGGTGGCT CTAATTTTTT ACCCCGGAAT
CAACAAACTC TATTTGATTT AATAGAGATA AAAGAAAATG AGGTTGAGAA GTTAACCTCA
GAATTTTTTA ATGGAGTCGA GCGAACAGGA GAGAAATTAG ACCTTGCTAT TAAAGAGCTT
GAAGACTCAG AAAACCAGAA AAGGCCCCAG AATGAAATTG AGCAAGATCA AAATGAATAT
ACAGCTGCAA TAAGTAAGAA AGTTAACTAT AGATATAACC CTTCAGATGA TATTGGTGCC
GGTGGTCAAA AGACAAAATA TAAAGCCAAT GTTGAAGCAA TTAAGCTGCT AAAGGATATC
GAAAAAGAAA AACGTATTGC AACAAGTCAG GAACAGAGCA TACTTACCCG GTACACCGGG
TGGGGCGGAT TATCCCAGGT ATTCAATGCA GAAGCCAAAG GCTGGGAAAA TGAGTACCAG
GAATTAAAAG AACTCCTTAC TGAGGAAGAA TACAGCAGTG CCAGAGCATC TACGCCCAAT
GCACATTATA CAGAGCCGCA AGTAATCAAA GCTATATACA AAGCATTGAG CAGGTTTGGT
TTTAAAGGGG GTAACATACT TGAGCCAGCA ATGGGTATCG GCTTATTTTA TTCCTTAATC
CCTGAAGACA TTTCCGATAA ATCCCAATTA TATGGTGTCG AACTGGACAG CATATCCGGA
AGGATATCAA AGCAACTTTA CCAAAAGGCT GATATAAGGA TTCAGGGGTT TGAAGATACA
GACTTTTCAG ACAATTTCTT TGATATTGCA GTGGGCAATG TCCCTTTTGG AGATTACAAG
CTCCGTGATA AAAGATATGA CAAGCTCAAC CTTAACATAC ACGATTACTT CTTTGCAAAG
ACATTGGACA AGGTTCGTCC CGGAGGAATT ATAGCATATA TAACCAGCAA AGGAACTCTG
GATAAGGCAA ACGGTTCCTT CAGGAGATAT CTTGCGGAAC GTGCCGAGCT AATAGGAGCA
ATAAGGCTTC CAAACAATGC CTTCAAGCAG ATAGCAAATA CAGATGTAAC AACAGACATT
ATTTTTCTTC AGAAACGTGA TCATGCAATT ATTTTGGATG AAGAACCGGC TTGGACGGGA
CTTGGCCAGA CTGATGACGA AGTACCTGTA AATCAGTATT ATCTGGATAA TCCTGATATG
CTCCTTGGGA AAATGATTTT TGATAACAGG ATGTTTGGAA GTGACGGAAA ATATACAAGC
CTTGTTGCAG AGGATAATTT CAATTTGGTT GAAGCTCTTG ACAAAGCAGC TGAAAAACTA
CATGCCAGGA TAGAAATAAT TGATACTGGA AAAGAAAATC AGGAAGAAGA ATATCTGCCT
GCAGAGCCGG AAGTCAAAAA CTATACATAT GTATTAAAAG ATGAAAACAT CTACTATAGA
GAAAATTCCA AAATGGCTAA AGTAATACTT CCTGAAAAAA CTTCCCAACG TGTCAGGGGC
ATGTGTGAGG TAAGAGAAAT ATTAAGAAAG GTTATAGAAA TCCAGACAGA AGGTTGTACT
CAGGAAGAGC TTAAACCATA TCAGGAGAAG TTATTAAAGT CATATAATAC ATTTACACGG
AAGTATGGAA TAATAAACAG TACGGCAAAT CTAAGGGCCT TTCAAAAGGA TTCAGATTTG
CCTTTATTAT CTTCTCTTGA AGTTCTCGAT GAAAAGGGCA ATGTTAAGTC ATTGGCTGAT
ATATTCTACA AACAAACAAT CAGACCATAC GAGATAATTA CTCAAGTTAG TACGGCAGCG
GATTCTCTGG CAGCGTCTCT TTCTGAAAAA GGAGAAGTTG ATTTGGATTA TATGGCGTCT
ATATATAAAG CTGATAAACA AAAGATAATT AGTGAACTGG AAGGACTTAT ATTCCTCAAT
CCTGATAAAA AAAGATATGA GACAGCAGAC GAATACCTAT CAGGAGATGT ACGCTATAAG
TTGAAAACCG CTTTATATTA CGCCAAGGAT AATCCAGATT ACCAGATAAA TGTTAAGGCC
CTTGAGAGCG TTCAGCCTGT GGACTTGGAC GCGTCTGAAA TAGATGTAAA GCTTGGGACA
ACATGGATTG AAACCGAAGA TATAAATCAA TTTATATACG AGTTGCTAAA GGTACCGGGG
TTCTTTCAAA GAGATAATAG CAAATCAAAG GGAACCGGAA TCTACACAAC ATACAATTCT
TTTTCAAGTT CATGGTCAAT ACAGAATAAG TCACTGCAAT GGAACAGTAT GAAGGCCACT
GAAGAATACG GAACAAAAAA GGCTGATGCC TACAGTATTA TAGAAGATAC TCTAAACTTG
AGAAGTGTTG TAGTTAAGGA TAGGGTAGAA GATGCTGACG GAAAAGTAAA ATATGTTGTA
AACAAGAATG AAACAATAGC AGCAAGGGCA AAGCAGGATG CTATCAAGGA AGAATTCCGG
GACTGGATAT TTAAAGACCC GGACAGAAGG AACAAGTATG TTAACTTCTA CAATACCAAC
TTTAATAACA TCAGGTTAAG GGAATACGAT GGTTCACACC TAAAATTCCC GGGCATGAGT
CCTTACATAA AACTTCGAGA ACATCAGAAA AATGCCGTAG CAAGAATACT ATACGGCGGT
AATACCTTAT TGGCACATGT TGTGGGAGCA GGCAAGACAT TCACCATGCA GGCTGCCTGT
ATGGAAATGA GAAGGCTCAA TATAATTAAG AAAGCCATGT TCGTACTGCC TAACCATTTG
ACAGAACAGC AGGGAGCAGA TTTCCTAAAA CTATATCCGG CTGCCAACAT CCTGGTGGCC
ACTGAAAAGG ATTTTGAAAC GGCAAACAGA AAGAGATTTC TGGCGAGGAT AGCAACAGGT
GATTATGATG CAATAATCAT AGGCCAGAGT CAGTTCGAGA GAATACCGGT ATCGGTTGAA
CTGCAAAGCC AGATAATAAA AAACACCATA GAAGAAATAG TTGAATTTGT ATCTGCTTAT
AAGCAGCAAA ACGGAGACAA ATGGACAATT AAGCAGATGG AGAAAATGAA GTTTAATCTT
GAAGCTAAGT TGGAACAGCT GGCGGATGCT CCCAAGGATG ATGTATTAAC CTTTGAACAG
CTGGGGGTTG ATTGCTTGTT TGTAGACGAA GCCCATTATT ATAAAAATGG CGGTGTATTT
ACCAAGATGA GAAACGTTGC GGGTATATCA GGGAACTCTG CAAAAAAGGT TCTGGATATG
CAGATGAAAT GCGACTATAT AATTTCGGAA AACAACGGAC GAAATGTTAT CTTTGCAACA
GGAACACCTA TAAGCAATTC AATGACCGAA ATGTTCATAA TGCAGCAGTT CTTGCAAAAA
AATGAACTTC GAGAAAAAGG GATTCATAAC TTTGATGCAT GGGCAGCAAG TTTTGGCGAA
GTTGTATCAG CACTTGAACT TGCACCTGAA GGCCGTGGAT TCAGAATGAG AAACAGATTC
AGTAAATTTA CTAATCTTCC TGAGTTAATG ACAATGTTTA AAAATATAGC TGATATTCAG
ACTGCCGACA TGTTAAACCT CCCTGTACCA AAACTTAAAA ACAATAAGGT TACAGTGGTA
ACTTCTGAGC CGTCGGAGTT GCAGCAGGAA CTTGTACAGG AAAGTGCGGA ACGAGCTGAA
AGAATCAGAA ACGGCCTTGT AGATCCGTCA ATAGATAACA TGCTTAAAAT TACAAACGAA
GCAAGGCAAT TCGGGACAGA TCCACGATTA ATAATTCCTG ATGCACCTGA TGAACCGGGG
AGCAAAATAA ATAAACTGGT GGACAATGTA TATCAGAAAT ACATTGAATT CAACTCAAGC
AAGGGTACAC AAATAATATT CTCTGATGTT GGAACCCCAA ATGACCGTGG AGGTTTTTGT
GCTTATTATG ATATAAAAAA TAAACTTGTC AGTTTCGGGA TTCCGGAAGA TGAAATATGC
ATAATCCACG ATGCCAAAAC AAAGAAGCAA AAAGAATCAA TGTTCTCTGC AATGCGTACA
GGAGAGAAAA GAATAATCCT GGGTTCAACT CCCAAAATGG GAACCGGGAC AAACATTCAA
AACAAGCTTG TTGCACTCCA TCACCTGGAT TGTCCATGGC GGCCTGCAGA TATAGAACAA
CGTGATGGAA GAATACTAAG GCAGGGAAAC GAAAACGAGA AAGTAGAGAT ATTCAGATAT
GTTACAAAGG ATACGTTTGA TGGGTACCTC TGGCAAACCG TTGAGCAGAA ACAACGCTTT
ATCTCACAGA TAATGACAAG CAAGGCTGTA AGCCGTAGCT GTGAGGATAT AGATGAAGTA
GTTTTAAACT ATGCTGAAAT AAAAGCTTTG GCAATGGGAG ATCCAAGAAT AAAGGAAAAG
ATGGATTTGG ACATAGAAAT AAATAAGCTT TCCGTACTAA AGGCTGCTTG GTCAAAACAA
AGATACTCTC TACAAGATAG TATAGTGTAC TCGATTCCCA AAGGTATTAA TTCATATCAA
GTAAAAATAG AAGCCATACA AAAGGACATA GAATTACGAA ACTCAAACAA GTTCCCGGAT
GATGAGTTCA GCATTGTATT GGAAAACACT CTGATTACTG AAAAAGAAAA AGCGGGAGAA
CTTTTGTTAC TGCTTTGTAG CAAGGCAAAA AAAGAGAACT GGAAGCAGGT AAGAATCGGA
ACCTACAAAG GCTTTGATTT AAAGCTTGAA TACAATGAAT TCTTAAGTGG GTTTAATCTA
CATATTACAG GTAAATATCA GTACACAATT GAGCTTGGTG GGAATCCCAT CGGGAATATC
ACACGTACAG ACAATGCACT GGAAGGTATG GAACCGTCAT TGCAAAGATG CCGCAATCAA
TTGGAACAAC TTAATCAGGA CTTCGAAACA GCAAAGGCAG AATATGAAAA GCCTTGGCGT
TACGAGGAAG AATACAAGAC AAAATTAGCA CGTCAGGCAG AACTAAACAT TGAACTTGAT
TTAAATAAGC AGGATGAAGT TCTTGGAGAT GAAGCGTCAA TTGAAGACAA AGAGGTAGCA
ATAAATGTTT CGTCTGTAGT TACTGATGAA GAAGAGCAGG AAGTTGAGAT GTAA
|
|---|
| Protein sequence | MPSFKTMFNE TMKQITRNDS QWKKFLGFSG QLFKYGFYET VLIYNQRPDA TIVADMDTWN
KRVGRWINRG SRAIKVFDPD SKGVRYLFDI SDTHGNYTSR INSYTIKSNA AQNYIMEYLG
VEKERDFEGF VESLCTEFLE KHDYPGEYFD CFVQDSVVYS VFDKLKFDTE GKYHFEDILQ
QLDVGQATEY ASIICEISKQ VLRLLEKPAR IYKNKEISKN ANQIHRRNWT SGISGDTGGN
TGSHEQRDGD NKESGTDIQS GVQGRIGGDT LSGDITGREP RVGGNAGRDI RSGSSEILGT
KLPEESAGNE DSGYMVQYNL SGRHTSSFND AKDSGTVKTA ISGTQNGQLH GTGEILQLDK
GNSSGNSDER SSQNSKIKEN NSGKDKESSE NGGSNFLPRN QQTLFDLIEI KENEVEKLTS
EFFNGVERTG EKLDLAIKEL EDSENQKRPQ NEIEQDQNEY TAAISKKVNY RYNPSDDIGA
GGQKTKYKAN VEAIKLLKDI EKEKRIATSQ EQSILTRYTG WGGLSQVFNA EAKGWENEYQ
ELKELLTEEE YSSARASTPN AHYTEPQVIK AIYKALSRFG FKGGNILEPA MGIGLFYSLI
PEDISDKSQL YGVELDSISG RISKQLYQKA DIRIQGFEDT DFSDNFFDIA VGNVPFGDYK
LRDKRYDKLN LNIHDYFFAK TLDKVRPGGI IAYITSKGTL DKANGSFRRY LAERAELIGA
IRLPNNAFKQ IANTDVTTDI IFLQKRDHAI ILDEEPAWTG LGQTDDEVPV NQYYLDNPDM
LLGKMIFDNR MFGSDGKYTS LVAEDNFNLV EALDKAAEKL HARIEIIDTG KENQEEEYLP
AEPEVKNYTY VLKDENIYYR ENSKMAKVIL PEKTSQRVRG MCEVREILRK VIEIQTEGCT
QEELKPYQEK LLKSYNTFTR KYGIINSTAN LRAFQKDSDL PLLSSLEVLD EKGNVKSLAD
IFYKQTIRPY EIITQVSTAA DSLAASLSEK GEVDLDYMAS IYKADKQKII SELEGLIFLN
PDKKRYETAD EYLSGDVRYK LKTALYYAKD NPDYQINVKA LESVQPVDLD ASEIDVKLGT
TWIETEDINQ FIYELLKVPG FFQRDNSKSK GTGIYTTYNS FSSSWSIQNK SLQWNSMKAT
EEYGTKKADA YSIIEDTLNL RSVVVKDRVE DADGKVKYVV NKNETIAARA KQDAIKEEFR
DWIFKDPDRR NKYVNFYNTN FNNIRLREYD GSHLKFPGMS PYIKLREHQK NAVARILYGG
NTLLAHVVGA GKTFTMQAAC MEMRRLNIIK KAMFVLPNHL TEQQGADFLK LYPAANILVA
TEKDFETANR KRFLARIATG DYDAIIIGQS QFERIPVSVE LQSQIIKNTI EEIVEFVSAY
KQQNGDKWTI KQMEKMKFNL EAKLEQLADA PKDDVLTFEQ LGVDCLFVDE AHYYKNGGVF
TKMRNVAGIS GNSAKKVLDM QMKCDYIISE NNGRNVIFAT GTPISNSMTE MFIMQQFLQK
NELREKGIHN FDAWAASFGE VVSALELAPE GRGFRMRNRF SKFTNLPELM TMFKNIADIQ
TADMLNLPVP KLKNNKVTVV TSEPSELQQE LVQESAERAE RIRNGLVDPS IDNMLKITNE
ARQFGTDPRL IIPDAPDEPG SKINKLVDNV YQKYIEFNSS KGTQIIFSDV GTPNDRGGFC
AYYDIKNKLV SFGIPEDEIC IIHDAKTKKQ KESMFSAMRT GEKRIILGST PKMGTGTNIQ
NKLVALHHLD CPWRPADIEQ RDGRILRQGN ENEKVEIFRY VTKDTFDGYL WQTVEQKQRF
ISQIMTSKAV SRSCEDIDEV VLNYAEIKAL AMGDPRIKEK MDLDIEINKL SVLKAAWSKQ
RYSLQDSIVY SIPKGINSYQ VKIEAIQKDI ELRNSNKFPD DEFSIVLENT LITEKEKAGE
LLLLLCSKAK KENWKQVRIG TYKGFDLKLE YNEFLSGFNL HITGKYQYTI ELGGNPIGNI
TRTDNALEGM EPSLQRCRNQ LEQLNQDFET AKAEYEKPWR YEEEYKTKLA RQAELNIELD
LNKQDEVLGD EASIEDKEVA INVSSVVTDE EEQEVEM
|
|---|
| |