| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2942 |
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| Symbol | |
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| ID | 7311554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 3501368 |
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| End bp | 3502330 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643609842 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002507216 |
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| Protein GI | 220930307 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000172076 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAG GTAATGTTGA ATTAAAAAAC AATATATTTT TAGCTCCTAT GGCGGGAGTA
ACGGACATGC CTTTTCGCAT ACTTTGCAAG GAGCAAGAAT GTGGTCTTGT TTATACCGAG
ATGGTAAGTG CAAAAGGCAT GCACTATGAT GATGATAAAA GCAACAAGCT TACATTGATG
CATGAGAAAG AAAGGCCGGG AGCTGTTCAG ATTTTTGGTT CTGATCCCAA AATCATGGCA
GAGGTTGCAG AGAAGCTGAA CAAATCCGAT GCAGCGATAA TTGATATCAA TATGGGATGT
CCTGCACCTA AAATAACTAA AAACGGTGAG GGCAGTGCAT TGATGAAAAA TCCTGAGCTG
GTTGCAGAAA TAATAAAATC GGTTGTGTCT GCTTCTCAAA AACCCGTAAC CGTAAAGATT
AGAAAAGGCT GGGATGACAG CACCATTAAT GCGATTGAAA TAGCACGTAT CGCTGAGAAA
AACGGAGCCA GAGCCATTGC AGTTCATGGA AGGACTCGGG AACAGTACTA CAGCGGAAAA
GCCGACTGGG ACATTATAAG GCAGGTAAAA GAAGCTGTTT CAATACCTGT AATAGGAAAT
GGTGATGTAA CTGGCCCTAA AGAAGCTCAA AAGCTTCTGG AAGAAACAAG GTGCGATGCA
ATAATGGTTG GAAGAGGTGC ACAGGGTAAC CCCTGGATAT TTAAAAAAAT AGTCAAATTT
CTTGAGGATG GAACAATAAT TTCTGACCCT TCACCTAAAG AAAAAATTGA AACAATTATA
AGGCATATGG ATATGCTAAT TGACTTAAAA GGAGAAAAAA CTGGTATACT GGAAATGCGT
TCACACATAG CGTGGTATAT AAAAGGTATG AGGGATGCAG CATATACAAA ACAAAAAATA
TTCCAAATGA AAGGTAAAGA AGAAATTATC ACACTTCTGA GGAGCTTTCT GATGAGGCAG
TAG
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| Protein sequence | MKIGNVELKN NIFLAPMAGV TDMPFRILCK EQECGLVYTE MVSAKGMHYD DDKSNKLTLM
HEKERPGAVQ IFGSDPKIMA EVAEKLNKSD AAIIDINMGC PAPKITKNGE GSALMKNPEL
VAEIIKSVVS ASQKPVTVKI RKGWDDSTIN AIEIARIAEK NGARAIAVHG RTREQYYSGK
ADWDIIRQVK EAVSIPVIGN GDVTGPKEAQ KLLEETRCDA IMVGRGAQGN PWIFKKIVKF
LEDGTIISDP SPKEKIETII RHMDMLIDLK GEKTGILEMR SHIAWYIKGM RDAAYTKQKI
FQMKGKEEII TLLRSFLMRQ
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