Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2886 |
Symbol | |
ID | 7312419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 3442650 |
End bp | 3444134 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643609781 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002507160 |
Protein GI | 220930251 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000863284 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATGC TTAGTAGTTT GGTAGAAGAA CAGCTGCATC AGAAAAATAA AATAGTGTTG CTGTGTTTGC TTGCTTCAAT TTCATTAAGA GTGACAGTTG ATTCTATTTT TAAATTACCT CTTAATGATA TCTTGCTTTT AGCTATTGTA GGATATGCCT TATGTGCTAT TGGCAGTGTG TTTTCATTTA AGAAGTTATA TCCAAAAGCG ATTATGTACT ACTTTACTAT TACTATGGGA ATCATCAGCT TTATAATGAT CGTCAGTAAT CCAAGTCTTA CTACATACCT TACGGTTTTT CTTGCTATTG TAATTGTCAG TATTTATAGT GATATACGCC CCGTAATAGT TTGTTCAATC ATAGGTTGTT TCCTGACTAC CTATTCATTT TTTAACTATA AGCCGCAAAT ATTTGAAAAA AATAATTATA TTGATCTGGT CTTTTTTAAT ATGTACATAT TTGTATGTGC ATTTGTTCTA TTCTTTTTGA GTTATCTTAC AAAGAAGTTA TATGTCAAAT TGGAAAGTAC GGCTGTTAAT GCCATATCAT CAAAAGAAAA GGCTGAAGGT CTTTATAACG AAATAAAGGC AACCAGCCAG AGCCTTGCCA AGATAAGTGC AGATATAAAG GACAGTATAA TTTCCACACA GGAAATCTCT GACGGAATAG GTCAGGCTAT CACCATTGTA GCTGAAGAAG CTCAAATGGA AGTAACAAGT ATCCATAAGA TAAAAGAATT ATTCGATAAC GGCAAAAACA AAATGGTATT GTCCATGGAA GCATCAAATA ATATGGATTC TGCGGTAAAA AGTGCAGTGT CCAATATAGC GAGCGGCAGC GATTATGTAG ATAATTTATC TAAGGAAATG AAGGAAGCAT TAAATACAAT GACTTTGGTA GAAAAGCTTG CTACTGACTT AATAGGAAAA AATAAAATTA TAAATAATAT ACTGACCTCT GTTAATAATA TTTCAAAGCA AACAAACCTG CTTTCGTTAA ATGCTTCAAT AGAGGCTGCC AGGGCTGGTG ATGCAGGAAA AGGTTTTTCT ATTGTCGCTC AGGACGTAAG AAGGCTGGCC GAGGAATCCA ATATTTTGAC ACATCAGATA GAAAGTATAT TAAAAGAGAT GGAACAAAAT GCACTTGATG TCTCCAAAGA GATTACCAAG GAAAAGATCT ATATTAATAA CAGTAATTCC ATCACCGACG CAACTAAAGA TATATTTAAT AAAATTAAAA GCGAAATCCA CTGCATCGAA GAAAAAACCA ACAACATAAA GGAAACCTCT TCCAATTTGT ACCAATCGTT TGAATTAACT GACGAAGAGG TAAATGCAAT AAGTGATAAT ACTGAGAAAA ATGCTGCTAC AGCACAGGAA GTTACCGCAT GTATTAGTGA ACAGAATAGC CGTATGAATA TTATTGAGGA AAACTATATA AAACTTAATG CACTTATAGA TGAGCTAAAC AATTTTAACG GTTAG
|
Protein sequence | MNMLSSLVEE QLHQKNKIVL LCLLASISLR VTVDSIFKLP LNDILLLAIV GYALCAIGSV FSFKKLYPKA IMYYFTITMG IISFIMIVSN PSLTTYLTVF LAIVIVSIYS DIRPVIVCSI IGCFLTTYSF FNYKPQIFEK NNYIDLVFFN MYIFVCAFVL FFLSYLTKKL YVKLESTAVN AISSKEKAEG LYNEIKATSQ SLAKISADIK DSIISTQEIS DGIGQAITIV AEEAQMEVTS IHKIKELFDN GKNKMVLSME ASNNMDSAVK SAVSNIASGS DYVDNLSKEM KEALNTMTLV EKLATDLIGK NKIINNILTS VNNISKQTNL LSLNASIEAA RAGDAGKGFS IVAQDVRRLA EESNILTHQI ESILKEMEQN ALDVSKEITK EKIYINNSNS ITDATKDIFN KIKSEIHCIE EKTNNIKETS SNLYQSFELT DEEVNAISDN TEKNAATAQE VTACISEQNS RMNIIEENYI KLNALIDELN NFNG
|
| |