| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2836 |
|---|
| Symbol | |
|---|
| ID | 7311456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3389815 |
|---|
| End bp | 3391059 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643609731 |
|---|
| Product | phage portal protein, HK97 family |
|---|
| Protein accession | YP_002507110 |
|---|
| Protein GI | 220930201 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4695] Phage-related protein |
|---|
| TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAA TAAAAGGACT ATTTCGTTCA AGAGACAAAC CGCAAAACCG TGTGGGCAGT
GCATTTTCCT TTTTGTTTGG CGGTACGTCA TCTGGCAAAA CGGTTAATGA GCGTACTGCA
ATGCAGGCAA CTGCGGTGTA TGCTTGCGTA AGGATACTAG CTGAAGCAAT TGCAGGACTG
CCACTACATG TATATAGATA TCGTTCTGAT GGAGGTAAAG AAAAGATTCC TTTCCACCCG
CTGTATTACC TTCTTCATGA TGAACCAAAT CCAGAGATGA CTTCATTCGT GTTTCGAGAA
ACACTGATGA GTCATCTTTT GCTTTGGGGA AATGCCTATG CACAGGTGGT CAGAAACGGT
CGTGGGCAGG CAGTTGCACT TTATCCCCTA CTTCCCAACA AGATGGAAGT TAGTCGAGCA
ACAAACGGAG AGCTGGTCTA TACCTACTAT CGTGATACTG ATGAAAGTGG CCTAAACCCA
AAAGGTGGCT ATGTCACACT CCGTAAAGAT GAAGTTCTAC ACATACCTGG CTTAGGTTTT
GATGGACTCA TTGGCTATAG CCCTATCGCT ATGGCGAAAA ATGCAATCGG TATGTCACTT
GCTACTGAAG AGTACGGTGC GGCATTCTTT GCCAATGGTG CTAATCCCGG AGGTGTGCTG
GAACACCCAG GAGTAATCAA AGATATACAG AGGGTCAAGG ATAGTTGGAA TAGCGCCTAC
CAAGGCACAG GCAACGCTCA CAAAATCGCT GTGTTGGAAG AAGGCATGAA GTTCCAAGCC
ATTGGTATCC CGCCGGAACA GGCGCAATTT CTTGAAACAC GGAAATTCCA AATTAATGAG
ATTGCGAGGA TTTTCCGTGT GCCGCCCCAT ATGGTGGGTG ATCTTGAGAA GTCTAGTTTC
TCCAATATTG AGCAGCAGTC TTTGGAGTTT GTAAAATACA CCCTCGATCC GTGGGTGGTG
CGATGGGAAC AAAGTCTCCA GCAATCGCTT ATTTTGCCTT CTGAGAAAAC TTCACTGTTT
ATCAAGTTCA ATTTGGACGG TCTGCTTCGT GGTGATTACC AAAGTCGTAT GAATGGCTAT
GCTACAGGTC GACAAAATGG CTGGATGTCT GCCAACGATA TCCGTGAACT GGAGGATATG
AACCGAATAC CGGCTGAGGA AGGCGGCGAT TTATATCTGG TTAACGGAAA TATGACAAAA
CTGGCTGACG CAGGCGCGTT TGCCAAAACC GAAGGAGGTC AGTAA
|
|---|
| Protein sequence | MNLIKGLFRS RDKPQNRVGS AFSFLFGGTS SGKTVNERTA MQATAVYACV RILAEAIAGL
PLHVYRYRSD GGKEKIPFHP LYYLLHDEPN PEMTSFVFRE TLMSHLLLWG NAYAQVVRNG
RGQAVALYPL LPNKMEVSRA TNGELVYTYY RDTDESGLNP KGGYVTLRKD EVLHIPGLGF
DGLIGYSPIA MAKNAIGMSL ATEEYGAAFF ANGANPGGVL EHPGVIKDIQ RVKDSWNSAY
QGTGNAHKIA VLEEGMKFQA IGIPPEQAQF LETRKFQINE IARIFRVPPH MVGDLEKSSF
SNIEQQSLEF VKYTLDPWVV RWEQSLQQSL ILPSEKTSLF IKFNLDGLLR GDYQSRMNGY
ATGRQNGWMS ANDIRELEDM NRIPAEEGGD LYLVNGNMTK LADAGAFAKT EGGQ
|
|---|
| |