| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2650 |
|---|
| Symbol | |
|---|
| ID | 7311293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 3196300 |
|---|
| End bp | 3197220 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643609575 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002506954 |
|---|
| Protein GI | 220930045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATT CACAGCAGTA CTACAAAGAA CCGGGTTTAT TTACAAACAT CAGCAGTCAT
AATTATGTTA TTGAAAATAT TGCTAACAAT CCGGAATACA TTTGCCAGAT CGTTCAAGGT
TTAATTGTGC ACGGAGCGTG GACTAAGCTG TATGGAATTC CTTCGGATTC AGAAAAAGAA
AGTTACCCTT TGTACTTAAG CGATTTATTA ACCAAAATAC TTAATCTTGA CACTCGTTCC
ATTTTAATCC CGCGATTACC TGAAGACCGC GTAATTGCGT CTTGCAGGGA ATTTGCAACT
TTAGCATGTG CAATCTTGAG GGCAAAAGGC ATACCTGCCC GATGTAGATG TGGCTTTGCG
GTTTATTTAG GTTATCAAGG CAGCTTAGAA GACCATTGGG TTGTGGAATA TTGGAATGGA
TGTAAGTGGA TTATGAATGA CCCTCAGATT GATCCATTCC AATTAAGCAT GCTCTATAAA
TGGGAGCTTA ATAAAGTTAC TCTTAAAAAC GAAAAAATAA TTAACAGTGA CTTCCCAAAT
CCTCACAATA TTTCTCTTGA AAGTGACTTC ATTGTTGCCG GTAAAGCTTG GCAGCTTTGC
CGGAATGGCC TGTTTGACCC AATGAAGTGT GGTATCGAAG ATCTTTGGGG ATTATGGTTT
GTCAGGGGAC AGCTTCTTCG AGACTTTGCC GCTCTCAACA AAATCGAAAC AACTCCGCAT
TTATGCAGAC CCGACCTTGA TTGGGATACT TGGCGTCTTT TAACTGCTAA TGATTCTGAA
CTAGACGAAG CAGACTTCCT GTTGCTTGAT AAGATTGCTT CTTTGTCTTT AGATGCTGAC
AACAACTTAG GCACTATCAT CGAAACATAC GAGTGCAATG TCTCCCTACA GGTTCCTAAA
CGTATTCTTG AATCAAGATA A
|
|---|
| Protein sequence | MKDSQQYYKE PGLFTNISSH NYVIENIANN PEYICQIVQG LIVHGAWTKL YGIPSDSEKE
SYPLYLSDLL TKILNLDTRS ILIPRLPEDR VIASCREFAT LACAILRAKG IPARCRCGFA
VYLGYQGSLE DHWVVEYWNG CKWIMNDPQI DPFQLSMLYK WELNKVTLKN EKIINSDFPN
PHNISLESDF IVAGKAWQLC RNGLFDPMKC GIEDLWGLWF VRGQLLRDFA ALNKIETTPH
LCRPDLDWDT WRLLTANDSE LDEADFLLLD KIASLSLDAD NNLGTIIETY ECNVSLQVPK
RILESR
|
|---|
| |