| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2614 |
|---|
| Symbol | |
|---|
| ID | 7311261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3148181 |
|---|
| End bp | 3149161 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643609543 |
|---|
| Product | glycoside hydrolase family 43 |
|---|
| Protein accession | YP_002506922 |
|---|
| Protein GI | 220930013 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3507] Beta-xylosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA TTGTAAAACA AAAAGAGCCT TTAGTAACTC ACATTTATAC AGCAGACCCG
TCTGCTCACG TATTTGACGC AAAAATATAT GTATATCCAT CACATGATCT TGACGAGGAT
ATAGAATCAA ACGATAACGG AGACCAGTAC ATGATGGAGG ACTACCACGT ATTGTCCATG
GATGATTTAA ATTCGCCCTG CGTTGACAAT GGTGAGGCCC TTCATATGAA AGACATTCCA
TGGGTATCTA AACAAATGTG GGCACCGGAT GCTGCTTACA AAAATAATAC CTACTATTTG
TACTTTCCCG CAAGAGACAA AGATGATATA TTCAGAATCG GGGTAGCTAC AAGTTCATCC
CCGACAGGTC CTTTTACAGC TCAAAAAGAG CCAATTCCCG GCAGTTTCAG CATAGACCCT
GCTGTTTTGG TGGATGATGA TAATAGAGCA TACATCTATT TCGGCGGTTT ATGGGGAGGC
CAGCTTGAGA AATGGCAGAC AGGAAGCTTT AATCCTGACG GAGAAGGTCC CGCTGCAACA
GAACCTGCCA TAGGTCCAAG AGTAGCTGAA TTGAGTGATG ATATGCTTAC ATTCAAAGAG
GCACCAACAG AGATTTCCAT TGTTGATGAA GAGGGGAATC CAATCCTAGC CGGCGATGAA
GACAGAAGAT ACTTTGAAGG CCCATGGATG CACAAGTATA ATGGGAATTA CTACCTTTCC
TACTCGACAG GTACAACTCA CAGCATTGTA TACGCAGTTG GTAAAGATCC GAAAGGACCT
TTTGTATTCA AAGGTAAGAT ACTTACCCCG GTAGTAGGCT GGACTACCCA CCATTCAATT
GTTCAATTCA AGGGTAAGTG GTACCTGTTT TACCATGACA GCTCATTATC AGGCGGTCGT
GATAATAAGA GATGTGTAAA ATTTACCGAA CTGAAATATA ACGAGGATGG GACTATTCAA
ACAATAGATC CATACAAGTA A
|
|---|
| Protein sequence | MEKIVKQKEP LVTHIYTADP SAHVFDAKIY VYPSHDLDED IESNDNGDQY MMEDYHVLSM
DDLNSPCVDN GEALHMKDIP WVSKQMWAPD AAYKNNTYYL YFPARDKDDI FRIGVATSSS
PTGPFTAQKE PIPGSFSIDP AVLVDDDNRA YIYFGGLWGG QLEKWQTGSF NPDGEGPAAT
EPAIGPRVAE LSDDMLTFKE APTEISIVDE EGNPILAGDE DRRYFEGPWM HKYNGNYYLS
YSTGTTHSIV YAVGKDPKGP FVFKGKILTP VVGWTTHHSI VQFKGKWYLF YHDSSLSGGR
DNKRCVKFTE LKYNEDGTIQ TIDPYK
|
|---|
| |