Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2587 |
Symbol | |
ID | 7312384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3121079 |
End bp | 3121801 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643609516 |
Product | ABC transporter related |
Protein accession | YP_002506895 |
Protein GI | 220929986 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.163007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAATG TAAAGAATCT GCACAAGACT TTCGGTAGTC TTCAAGTTTT ACGAGGGATT GATGTAACTA TTGAAAGGGG CGAGGTAGTA GTGGTAATAG GCCCCAGCGG TTCTGGCAAG AGTACTTTTC TCAGGTGTTT GAACTTATTG GAACAGCCTA CCGGCGGTGA AATAATTTTT GAGGGCATAA ATATTACTGA TAAGAACAAC GATATAAATA AACAGAGGCA AAAAATGGGA ATGGTGTTCC AAAATTTCAA TCTGTTTCCA CACTTATCTA TAATTGACAA TATAACTCTA GGGCCTGTCA AACTCAAAAA TCAGACTCCT GAGCAGGCGA AACAGAACGC TATGTCGTTG TTAAAGCGTA TAGGATTGGA AGAAAAGGCA AATAACTATC CTGCACAGCT TTCAGGAGGA CAGAAACAAC GTATAGCTAT TGTGCGTGCT CTTGCAATGT CGCCGGGTGT AATGCTTTTT GATGAGCCTA CATCAGCACT TGATCCGGAA ATGGTAGGCG AAGTTCTGGA AGTAATGAAA GAGCTGGCAG CCGAGGGAAT GACAATGGTG GTTGTTACCC ATGAGATGGG CTTTGCAAAA GAGGTTGGGA CCAGAGTACT TTTCATGGAT GAGGGCAAAA TTAAGGAAGA TGCGCCACCC ATTGAAATTT TTACAAATCC TAAGGATGAA AGAACAAAAG AGTTTTTAAG CAAAATACTA TAG
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Protein sequence | MINVKNLHKT FGSLQVLRGI DVTIERGEVV VVIGPSGSGK STFLRCLNLL EQPTGGEIIF EGINITDKNN DINKQRQKMG MVFQNFNLFP HLSIIDNITL GPVKLKNQTP EQAKQNAMSL LKRIGLEEKA NNYPAQLSGG QKQRIAIVRA LAMSPGVMLF DEPTSALDPE MVGEVLEVMK ELAAEGMTMV VVTHEMGFAK EVGTRVLFMD EGKIKEDAPP IEIFTNPKDE RTKEFLSKIL
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