Gene Ccel_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2587 
Symbol 
ID7312384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp3121079 
End bp3121801 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content41% 
IMG OID643609516 
ProductABC transporter related 
Protein accessionYP_002506895 
Protein GI220929986 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.163007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAATG TAAAGAATCT GCACAAGACT TTCGGTAGTC TTCAAGTTTT ACGAGGGATT 
GATGTAACTA TTGAAAGGGG CGAGGTAGTA GTGGTAATAG GCCCCAGCGG TTCTGGCAAG
AGTACTTTTC TCAGGTGTTT GAACTTATTG GAACAGCCTA CCGGCGGTGA AATAATTTTT
GAGGGCATAA ATATTACTGA TAAGAACAAC GATATAAATA AACAGAGGCA AAAAATGGGA
ATGGTGTTCC AAAATTTCAA TCTGTTTCCA CACTTATCTA TAATTGACAA TATAACTCTA
GGGCCTGTCA AACTCAAAAA TCAGACTCCT GAGCAGGCGA AACAGAACGC TATGTCGTTG
TTAAAGCGTA TAGGATTGGA AGAAAAGGCA AATAACTATC CTGCACAGCT TTCAGGAGGA
CAGAAACAAC GTATAGCTAT TGTGCGTGCT CTTGCAATGT CGCCGGGTGT AATGCTTTTT
GATGAGCCTA CATCAGCACT TGATCCGGAA ATGGTAGGCG AAGTTCTGGA AGTAATGAAA
GAGCTGGCAG CCGAGGGAAT GACAATGGTG GTTGTTACCC ATGAGATGGG CTTTGCAAAA
GAGGTTGGGA CCAGAGTACT TTTCATGGAT GAGGGCAAAA TTAAGGAAGA TGCGCCACCC
ATTGAAATTT TTACAAATCC TAAGGATGAA AGAACAAAAG AGTTTTTAAG CAAAATACTA
TAG
 
Protein sequence
MINVKNLHKT FGSLQVLRGI DVTIERGEVV VVIGPSGSGK STFLRCLNLL EQPTGGEIIF 
EGINITDKNN DINKQRQKMG MVFQNFNLFP HLSIIDNITL GPVKLKNQTP EQAKQNAMSL
LKRIGLEEKA NNYPAQLSGG QKQRIAIVRA LAMSPGVMLF DEPTSALDPE MVGEVLEVMK
ELAAEGMTMV VVTHEMGFAK EVGTRVLFMD EGKIKEDAPP IEIFTNPKDE RTKEFLSKIL