Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_2534 |
Symbol | |
ID | 7311192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 3059527 |
End bp | 3060777 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643609463 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002506842 |
Protein GI | 220929933 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.73799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAT ATTATTCAAC AATAACCGGT TTTTTTGGTA ATTCAAATCC GGAGAAGCTA CTAAAGGAAT TCGGAAGTCC CTTATACGTT TACAACGAAA AGATATTAAG ACAGAAATGC AGGGATATGA AGAATCTTGT AGAATACAAA AACTTTGTTC CAAATTATTC CATAAAGGCA AACTCAAACC TTAGCTTAAT AAAAATTGTA AAGGAAGAAG GACTCAGGGC TGATGCTATG TCCGCAGGGG AAATACAGCT TTTGCTTCAC GCAGGTTTTG AGCCTGAGGA GCTGTTTTTT GTTCCAAACA ACGTATCAGA ATCAGAGCTA AAGTATGCAG TTGACAACGG TGTTCTGGTA AGTGTGGATT CACTGTCACA GCTTGAACTG CTTGGGAAGA TCAATACGGG AGGAAAAGCC GCTGTAAGGT TTAATCCGGG AGTCGGAGCA GGACACCACG AAAAGGTTGT AACAGCCGGA AAGAAAACAA AGTTTGGAGT AAACATTGAC TGTGTAGATC AGGTAAAGGA AATTGCCGGA AAATATAATA TGAAAATATG CGGTGTAAAC CAGCACATAG GTTCATTGTT TATGGAAGGT GATTCGTATA TTGAAGGGGT AAAATCATTA CTGTCTGTGG CAGAACAGTT TGAGGACATA GATTTTGTTG ATATGGGCGG AGGCTTCGGA ATTCCATATA ACAAGCAGGA AGGTCAGAAA CCGCTTGATC TTGCTAGCTT TAAGGAAAAG CTGACACAGG TCCTTGAGCA ATGGACTGAC AAATATGGAA AGAAGATACT GTTTAAGACC GAGCCGGGCC GTTATATAGT TGCGGAAAGT GGAGTAATTC TGGGAAATGT ATACACGACA AAGGCTAATT ATGGAAATAA GTATGTAGGT ACTGACATTG GATTCAATGT ACTGGCAAGA CCTGTTATGT ACGATTCACA CCATGACATA GAAGTATATA GAAACGGAAA GCCCTTAAAT GAGGCTGAAA CTGAAGAGGT AACAGTCGTT GGTAATATCT GTGAGAGTGG TGATATTATT GCAAAAAACA GGAAACTTCC TGTTATAAAG GAAGGAGATA TCCTTGGAAT AATGGATGCA GGTGCCTACG GCTTTGCAAT GAGTTCAAAC TACAACATGA GGCTTAGACC TGCAGAAGTG CTAATTAAGG AAGATGGAGA GCCTACGTTG ATAAGACGCA GGGATACTTT TGAGGACTTG ATAGCAAACT TCAATATATA A
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Protein sequence | MTEYYSTITG FFGNSNPEKL LKEFGSPLYV YNEKILRQKC RDMKNLVEYK NFVPNYSIKA NSNLSLIKIV KEEGLRADAM SAGEIQLLLH AGFEPEELFF VPNNVSESEL KYAVDNGVLV SVDSLSQLEL LGKINTGGKA AVRFNPGVGA GHHEKVVTAG KKTKFGVNID CVDQVKEIAG KYNMKICGVN QHIGSLFMEG DSYIEGVKSL LSVAEQFEDI DFVDMGGGFG IPYNKQEGQK PLDLASFKEK LTQVLEQWTD KYGKKILFKT EPGRYIVAES GVILGNVYTT KANYGNKYVG TDIGFNVLAR PVMYDSHHDI EVYRNGKPLN EAETEEVTVV GNICESGDII AKNRKLPVIK EGDILGIMDA GAYGFAMSSN YNMRLRPAEV LIKEDGEPTL IRRRDTFEDL IANFNI
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