| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2247 |
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| Symbol | |
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| ID | 7310930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 2623924 |
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| End bp | 2626290 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643609178 |
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| Product | ribonuclease R |
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| Protein accession | YP_002506568 |
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| Protein GI | 220929659 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.165281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT TGGAAGAACG GAAAGAACGA ATAGTTGCAT TTATGAGGGA TAAAGCATAC
AAACCTCTTT TATTTAAGGA ACTTAGAATG GTTCTTGACG TGCCGGAAGA GGATATAGAG
CTTTTTACTC AGGTGATGGA TGAGCTTGAG GAAGAGGGCA GAGTTTTTAA GACCCATGGA
AAAAGGTATG GCGTACCTTC AAGGTTAAAT TTGGTCACAG GAAGGATTCA AGGACATGAA
AGAGGATATG GATTCCTCAT ACCTGATGAT GAGCTTATGG AGGATGTATT TATCCCCGCA
GACAGCCTTA ACGGAGCCAT GCATAATGAC AGAGTTGTTG CACGGGTAAA TAAGAAAAGT
TCTTCTGACA GAAAAATGGA AGGCGAGATA ATCCGTATTC TTAAAAGGGC TAATACCACT
TTGGTAGGAA CCTTTGAAAA CAGTATGAGC TTTGGTTTTG TTGTTCCCGA TAATAAGAGG
ATTTCAGGAG ACATTTTTGT TTCAAAAAGT GAGTTTCACG GTGCCAAAAA AGGACAAAAA
GTTGTAGTTG AGATACTAAA ATACCCGGAG GCCAGAAGAA ATGCTGAGGG TAGAGTAATC
GAAATAATAG GCGACAGGAA CGAAACGGGT GTCGATATAC TGTCCATTAT AAAATCGTAT
AATCTCGAAG AGGATTTTCC TGAGGATGTT CTCAATCAGG CGAATTCCAT AGGTGATACC
GTAACAGAAG AAATGATACA AGGACGACGA GATTTAAGGG GACTTCGCAT GGTTACCATA
GACGGAGAAG ATGCAAAAGA CCTTGATGAT GCGGTTTCAA TTGAAACACT CGAAAACGGG
AATTACAGGC TTGGTGTTCA CATTGCAGAT GTAACAAACT ATGTTACGGA AAATTCACCC
CTTGATTTGG AAGCACTTGA CAGAGGAACA AGTGTGTATC TGGTTGACAG AGTTATACCC
ATGCTCCCAA GAAAACTGTC TAACGGTATA TGCAGTCTGA ATCCGCATGT GGACAGGCTG
AGTTTTAGTG TAATGATTGA CATAGATAAA AACGGTAAGG CATATAACCA CGAAATATTT
GAGAGTGTAA TCAATATAGA TGAGAGGATG ACATACACTA ACGTTTATAA AATATTGGAG
GAAAATGACC AAGAACTTAT AAAACGTTAC AGCCACGTCG TTTCTGACTT TCAAAAAATG
AAAGAACTGG CACTGATACT TAGAAAGAAA AGATTTCAGA GAGGTGCTAT TGATTTTGAC
TTTGATGAAG CGAGGGTAGT TATTGATGAA AAGGGCAAGC CTATTGACGT TAAAAGATAT
GAAATAACCA TAGCAAATCA GATAATAGAA GAATTCATGC TTGCTTGTAA TGAAACCGTT
GCGGAGCATT TTTTCTGGAC CAATACTCCC TTTGTCTATA GAATACACGA GGACCCTGAC
GAGGAAAAAA TTCACAACCT TAACGAATTC CTGTACAATC TGGGATATAG TATAAAGGGG
ATAAATAAAA TACACCCTAG AGCCTTGCAG GACCTATTGG AAAAGGTAAA AGGAACAAGG
CATGAGCGAA TTATTAGTAC AGCTATGCTC AGGTCACTGC AAAAAGCCCG ATATAGCAAT
GAAAGTACAG GCCACTTTGG ATTGGCTGCA AAATATTATT GCCACTTTAC ATCACCCATA
AGAAGATATC CTGATTTGAT AATTCACAGG ATAATGAAGC TTTACCTCAA AGGAGGTATG
AGTGAGGAGA AAATCAATCA CTTGGAAGGA ATACTGCCGG AGATAGCAAA GCAGTGTTCA
GAACGCGAAA GAGCCGCAGA CGAAGCGGAA AGAGAAAGTG AAGACCTCAA AAAGGTAGAA
TATATGAAAG CTCATGAGGG AGAAATATTT GAAGGTATTA TCGCAAATGT AACTTCCTTT
GGAATGTTTA TAGAACTTGA TAACACAATA GAAGGTCTTG TTAGAATGAG CAGCATGGAA
GATGACTACT ATAACTATAA TGAGAGTCAT TATTGCTTGG TGGGTGAACG TACACGCAAG
ATATACAGAA TAGGTGACTC TGTAAAGGTT ATTCTTGCAA AAGCTGACGT AGCTGCCAGA
AAAATAGAGT TCATACTGGT TGAATCTGAT GATGAGGATG ATTTTGACAA TATAGACCAG
GAAACAGAAG ATGAATTGAT ATTTACAAAG AACAAAAGTA GGAAATCATC TATTAAGAAA
AATAGTCAGA GTACAAAGGC AGTTAAAGCA GATGATAAGG GCGGAAGGAA CTCTGCTTCT
GATAATAAGT CCGGCAAAAA AGGAAAAATC ATTGATAAAA AAGTATATGA AAAAATAATG
GGAAAAAGAA AAAGGAAGAA AAGGTAG
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| Protein sequence | MADLEERKER IVAFMRDKAY KPLLFKELRM VLDVPEEDIE LFTQVMDELE EEGRVFKTHG
KRYGVPSRLN LVTGRIQGHE RGYGFLIPDD ELMEDVFIPA DSLNGAMHND RVVARVNKKS
SSDRKMEGEI IRILKRANTT LVGTFENSMS FGFVVPDNKR ISGDIFVSKS EFHGAKKGQK
VVVEILKYPE ARRNAEGRVI EIIGDRNETG VDILSIIKSY NLEEDFPEDV LNQANSIGDT
VTEEMIQGRR DLRGLRMVTI DGEDAKDLDD AVSIETLENG NYRLGVHIAD VTNYVTENSP
LDLEALDRGT SVYLVDRVIP MLPRKLSNGI CSLNPHVDRL SFSVMIDIDK NGKAYNHEIF
ESVINIDERM TYTNVYKILE ENDQELIKRY SHVVSDFQKM KELALILRKK RFQRGAIDFD
FDEARVVIDE KGKPIDVKRY EITIANQIIE EFMLACNETV AEHFFWTNTP FVYRIHEDPD
EEKIHNLNEF LYNLGYSIKG INKIHPRALQ DLLEKVKGTR HERIISTAML RSLQKARYSN
ESTGHFGLAA KYYCHFTSPI RRYPDLIIHR IMKLYLKGGM SEEKINHLEG ILPEIAKQCS
ERERAADEAE RESEDLKKVE YMKAHEGEIF EGIIANVTSF GMFIELDNTI EGLVRMSSME
DDYYNYNESH YCLVGERTRK IYRIGDSVKV ILAKADVAAR KIEFILVESD DEDDFDNIDQ
ETEDELIFTK NKSRKSSIKK NSQSTKAVKA DDKGGRNSAS DNKSGKKGKI IDKKVYEKIM
GKRKRKKR
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