| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2173 |
|---|
| Symbol | |
|---|
| ID | 7310865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 2543503 |
|---|
| End bp | 2543985 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643609105 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002506495 |
|---|
| Protein GI | 220929586 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000102699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATGTG ACGAATTTTC AACACGGATC GTCGCAATGA TGCAAACACT GTATCGCATT
AGTTATACAC AGCTATCACA AAGCTGTGAC CGAGACGAGG CAGTTCAGGA GTGTTTGTAC
AAGGCGTGGA AGAAGCGCCA TCAACTCAAA GATGAGCACT ATATGCAGAC TTGGGTTATC
CGTATTCTAA TCAATGAATG CCATAATATT CAGAGAAAAA AAGGCCGAGA ATTACCGCTC
AATGAAGTTC CTGAACGAGT CGTGCCTAAG GATGCCAATT TAGAGCTGCA TGATGCACTG
TTTAGTATAG ATGAAACGCT CCGTATGCCC ATTATTCTGC ATTATATTGA AGGCTTTTCA
ATAGGTGAAA TTTCGAAAAT TTTACGATGT CCTCAAGGCA CAGTTAAGTC GCGTATGCTG
CGGGGACGAC AGAAACTGAA AATAATTTTA TCCGAGGAGG TTAAATTGCC ATGCGAGATA
TAA
|
|---|
| Protein sequence | MTCDEFSTRI VAMMQTLYRI SYTQLSQSCD RDEAVQECLY KAWKKRHQLK DEHYMQTWVI
RILINECHNI QRKKGRELPL NEVPERVVPK DANLELHDAL FSIDETLRMP IILHYIEGFS
IGEISKILRC PQGTVKSRML RGRQKLKIIL SEEVKLPCEI
|
|---|
| |