Gene Ccel_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_2080 
Symbol 
ID7310781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2438409 
End bp2439752 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content37% 
IMG OID643609013 
Productpotassium uptake protein, TrkH family 
Protein accessionYP_002506405 
Protein GI220929496 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.61963e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAAATA TAGCTCCATC AAAGCTTTTG GTTTTGAGCT TCGCAGTTTT AATACTAACA 
GGGGCAATAC TCTTATCCAT GCCATTTTCC TCCAGAACGG GAGAATGGAC ACCTTTTATT
AACGCTCTAT TTACGTCTAC TTCTGCGTCA TGTATAACAG GTCTGATAAC TTATGATACC
TATACTTACT GGTCAACAGC AGGTCAAATA ATAATACTTG CATTAATTCA AGTAGGTGCT
TTGGGGATTA TTACCTTAGC AACCTTTTTT TCTCTTTTGT TAAAGAAAAA AGTCGGCTTA
AAAGGTATGC TCATTGCCCA GGAATCCATT AACTCTTTCA GGTATGATGA AGTTCTGAAG
CTTGTAAGAA GAATTGTAAC CACTACCCTG TTGGTTGAAT TCATTGGTGC AATAGTATTG
TCGTTGAGTT TTGTACCTAA GTTCGGTGCC TTTGGCCTTT ACATGAGTAT TTTTCATTCT
ATTTCAGCAT TCTGCAATGC AGGCTTTGAC ATAACAAGCG GTGCCGTAAA TGGAAAATTT
CTCAGTATTA CACCTTTTAA TAATGACCCT ATCGTAATAT ATACTATTTC AGGGCTAATA
ATATTTGGCG GTCTTGGATT TACTGTTTGG AGAGATTTGT ATGAGTTCAG AAAGAATAAA
GCACTACTTT TTCATACAAA ACTGGTTCTT GTAATAACTT CCATCCTATT GATATTCGGT
ACTTTATTTT TCTTTGCAAA CGAATATAAT AATTCTAAAA CACTGGGACC TATGAGCTTA
TTTGAAAAAA TTAATGCGGC CTTCTTTCAA TCCACTGCAG CCAGAACTGC CGGCTTTAAT
TCAATAAACC TTGCCGATAT GAAAGAGATT TCAAAGGTCT TTTCGGTGTT TCTAATGTTT
GTTGGAGCTG CTCCGGGATC AACTGGAGGC GGAATAAAGG TTACCACTTT CGGAGTTATA
ATGTTTGCTG TATTTTCCCA AATAAAAGGG TCCGGGGATG TAGTTCTTTT TAAGAGAAAA
CTACATCAGT ATACAGTAAA CAAGGCTCTT TCCATAACCG GATTAAGTGC TACTCTGGTA
ATACTAATAA CAACTGTCAT AGTTACGCTT CAAAGTGACT TGCACGTATT GGATATATTA
TACGAGGCAA CTTCAGCCTT TGGAACAGTA GGATTAACTC TTGGTCAAAC TCCCTCGCTG
AACACAGTAA GTAAAATACT CATTATCATG ACAATGTTTC TGGGAAGGGT CGGTCCATTA
TCATTTGCTG TAGCACTGAC TCTGAAATCC TCAAAACGAA CTTCTGACAT TGTTTATCCT
GAGGCCAAGA TACTTGTAGG GTAA
 
Protein sequence
MLNIAPSKLL VLSFAVLILT GAILLSMPFS SRTGEWTPFI NALFTSTSAS CITGLITYDT 
YTYWSTAGQI IILALIQVGA LGIITLATFF SLLLKKKVGL KGMLIAQESI NSFRYDEVLK
LVRRIVTTTL LVEFIGAIVL SLSFVPKFGA FGLYMSIFHS ISAFCNAGFD ITSGAVNGKF
LSITPFNNDP IVIYTISGLI IFGGLGFTVW RDLYEFRKNK ALLFHTKLVL VITSILLIFG
TLFFFANEYN NSKTLGPMSL FEKINAAFFQ STAARTAGFN SINLADMKEI SKVFSVFLMF
VGAAPGSTGG GIKVTTFGVI MFAVFSQIKG SGDVVLFKRK LHQYTVNKAL SITGLSATLV
ILITTVIVTL QSDLHVLDIL YEATSAFGTV GLTLGQTPSL NTVSKILIIM TMFLGRVGPL
SFAVALTLKS SKRTSDIVYP EAKILVG