| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_2024 |
|---|
| Symbol | |
|---|
| ID | 7310732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2383427 |
|---|
| End bp | 2383915 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643608958 |
|---|
| Product | CheD |
|---|
| Protein accession | YP_002506350 |
|---|
| Protein GI | 220929441 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG AAATAATAAA GGTTGGTATG GCTGACCTTA ATTCAGCACG TCACCCTTGT
ATGATAACTA CCCTTGGACT TGGTTCATGT GTAGGGGTTG CTCTGTTTGA TTCTACATCA
AAAATAGCCG GATTAGCACA TATTATGCTC CCGAACAGCG AACAGGCAAA AAATAAAACT
AATGTCGCAA AATTTGCTGA TACCGCTATT GTAAAATTAG TAGATGATAT GATAAAGCTT
GGTGCAAGGA AAGACAAAAT AGTAGCAAAA CTCGCCGGTG GAGCCCAGAT GTTCGTATTT
AGTCAAAGTT CTGATTTGAT GAGGATAGGA TACAGAAACG TGGTTGCATC GAAGGAAAAA
CTTAAACTAC TAAATATTCC CATAATATCA GAGGATACGG GAGGAAATCA CGGACGTACC
ATAGAACTGT ATTCCGATGA TGGGAGATTA ATGATAAAAA CAATCGGTTT TGGTATAAAA
CAAATATAA
|
|---|
| Protein sequence | MDIEIIKVGM ADLNSARHPC MITTLGLGSC VGVALFDSTS KIAGLAHIML PNSEQAKNKT
NVAKFADTAI VKLVDDMIKL GARKDKIVAK LAGGAQMFVF SQSSDLMRIG YRNVVASKEK
LKLLNIPIIS EDTGGNHGRT IELYSDDGRL MIKTIGFGIK QI
|
|---|
| |