Gene Ccel_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1989 
Symbol 
ID7310700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand- 
Start bp2355881 
End bp2356513 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content39% 
IMG OID643608924 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002506317 
Protein GI220929408 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA AAATTGATTA TACTCTTTAT CTTGTAACAG ACCATCAGCT GATGAGTACT 
AAAACACTGG AGGAGGCAGT AGAGCAGGCA ATAGCAGGAG GCTGTACTTT AGTGCAGTTA 
CGTGAAAAAA CTGCTTCTTC CCGGGATTTT TATCAAAATG CTATTAACGT AAAAACTATA 
ACAGACAAAT ATAATGTACC TCTTATTATA AATGATAGAA TTGATATTGC TTTGGCTGTA 
GGTGCTGACG GAGTCCACGT GGGGCAGAGC GATCTTCCGG CTGCTGTTGT GCGAAAAATC 
ATAGGTAACG ATAAGATACT CGGCGTATCG GCAGGGTCTG TTGAAAAGGC AATTGAAGCT 
CAGAAAATCG GTGCTGACTA TATAGGAGTG GGTGCTTTGT TTTCAACAAG CACAAAAACA 
GATGCAAAGG CAGTGTCTAT AGAAACTCTC ATGAAAATTG TAAGGGAAGT TTCAATTCCT 
GTGGTCGGTA TAGGCGGGAT AAATGCGGAG AATGCAGTAC AACTGAAAAA TACGGGAATA 
AGGGGTATTG CCGTAGTATC GGCTATTATT TCACAAAAGG ATATAAAATC ATCTGCTGAA 
AAATTGCTTG AAATATTCGT CAACAAAGCT TAA
 
Protein sequence
MKSKIDYTLY LVTDHQLMST KTLEEAVEQA IAGGCTLVQL REKTASSRDF YQNAINVKTI 
TDKYNVPLII NDRIDIALAV GADGVHVGQS DLPAAVVRKI IGNDKILGVS AGSVEKAIEA 
QKIGADYIGV GALFSTSTKT DAKAVSIETL MKIVREVSIP VVGIGGINAE NAVQLKNTGI 
RGIAVVSAII SQKDIKSSAE KLLEIFVNKA