Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1964 |
Symbol | |
ID | 7312305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 2324270 |
End bp | 2326048 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608898 |
Product | Fibronectin-binding A domain protein |
Protein accession | YP_002506292 |
Protein GI | 220929383 |
COG category | [K] Transcription |
COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTTG ATGGAATAGT AACAAAATGT ATAGTCAATG AATTAAATGA TTTGCTTTCG GGAGGGAGAA TTGACAAGGT ATTTCAACCG GAAAACGATG AAATTGTCAT GATGATTCGT TCAAAAGGTC AGAATTACAG ACTTGTTGCA AGTGCTAATG CAAGTAATCC AAGACTTCAT TTGACAACCT TACAGAAGGA AAATCCTGCT GCTCCCCCTG TTTTTTGTAT GCTTATGAGA AAACATGTTG CAGGCGGAAG GCTTTTGAAT ATAAGCTTTC ATGATTATGA GCGTATCATT ACATTGAATA TAGAGTCCGT TAATGAGCTT GGGGATCTTA CGGTTAAAAG GCTTGTTGTA GAAATCATGG GCAAGTACAG TAATATTATC TTACTTAATA GCGAAAATAA AATAATAGAT TCTGTTAAGC ATGTTGACAG CGATATAAGC AGTGTCAGAG AAATCATGCC TGCCAGAACC TATCTCCTGC CCCCTGCCCA GAACAAAGAG CTGCCTGAGA ATACGGAAGT TGATAAAATT TTTAATGAGG AGAACATTAA AGGGGCCAAA CACCCTGAAG GTTTGATTTT AAATACTGTC AAGGGTTTTA GTCCTTATAC CTGCCGCGAT ATATGTGCTT CCGCAGGGGT TCCTTCTAAA ACTCCTATAG GTGAGTTGAA CGATTCTGAT AAAGAAAAAA TTAAGGTTGC CCTTGCAAAG TATATTGATA AAATTAAAAG CAATAATTTC TCGCCCTGTA TTGTATATGA AGATAAAAGC ATGTTAAGAC CGATTGACTT TTATTGTTTT GAGCCCTCAA AGGAGGTTTT CTACAAAAGC TATGAACTCT TATCCACAGC CCTCGACCAA TACTACATGC TGCGTGATAC CAATGAGCGT CTGGGCCAGA AAATGGGTGA TGTTTTAAAG GTTGTTAAAA ACGGTATAGA ACGATGCCAG AAAAAGACCA CAATGTTTAA TGAAAAGCTT AGGGAAGTAT CAGAAAGAGA CAAGCTTCAA CTATACGGAG AGTTGATTAC TGCAAATATT TACTGCATTG CTGAAGGTGC AAAATCTGCA AGAGTACTAA ATTATTACAG TGCAAACGAA GAATATGTTG ATATTCCTTT AAATGAGTAT AAATCAGCTC AGGATAACGC TCAGAAATAT TTCAAGAAGT ATTCAAAGGC AAAAAGTACT CACTTAAATG TAACCAAACA GTTGGCTGAA ACCTTGTCAG AGCTTGAATA CCTTCAAAGC GTTCTTACTA TGCTTGGAAA TTGCAACTCA AGGCAGGAAA TCGATGAAAT AAGGCAGGAA TTAATCGACC AGGGATACAT TAGACAGTCA TATAAAAATG CCAAAAATAA GCAGGACAAG CCGTCTTCCC CTTTGGAATT TATATCAAGC GACGGATTTC AGATTTTAGT GGGTAAAAAC AACAAGCAGA ATGACTTGCT TACGCTAAAG ACAGCAGCCT CTAACGATTT ATGGCTTCAT ACAAAAAACA TACCCGGTTC ACACGTTATT ATAAGGACTG AGCGTAACAC TGTTCCGGAT TCAACACTGT TAGAAGCAGC GACCCTTGCT GCGTATCACA GCAGTGCAAA AATGTCTTAC AATGTTCCTG TAGACTACAC CACTGTAAGA AACGTAAAAA AACCTTCCGG TGCCAAGCCG GGAATGGTTA TATATGAAAA TTTTAAAACT ATTAATGTTA CACCTGAAGA AGAAAAAGTA ATGAAAATAA TAAACAATAA AAATATTTTT AGTAAGTAG
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Protein sequence | MPFDGIVTKC IVNELNDLLS GGRIDKVFQP ENDEIVMMIR SKGQNYRLVA SANASNPRLH LTTLQKENPA APPVFCMLMR KHVAGGRLLN ISFHDYERII TLNIESVNEL GDLTVKRLVV EIMGKYSNII LLNSENKIID SVKHVDSDIS SVREIMPART YLLPPAQNKE LPENTEVDKI FNEENIKGAK HPEGLILNTV KGFSPYTCRD ICASAGVPSK TPIGELNDSD KEKIKVALAK YIDKIKSNNF SPCIVYEDKS MLRPIDFYCF EPSKEVFYKS YELLSTALDQ YYMLRDTNER LGQKMGDVLK VVKNGIERCQ KKTTMFNEKL REVSERDKLQ LYGELITANI YCIAEGAKSA RVLNYYSANE EYVDIPLNEY KSAQDNAQKY FKKYSKAKST HLNVTKQLAE TLSELEYLQS VLTMLGNCNS RQEIDEIRQE LIDQGYIRQS YKNAKNKQDK PSSPLEFISS DGFQILVGKN NKQNDLLTLK TAASNDLWLH TKNIPGSHVI IRTERNTVPD STLLEAATLA AYHSSAKMSY NVPVDYTTVR NVKKPSGAKP GMVIYENFKT INVTPEEEKV MKIINNKNIF SK
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