Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1902 |
Symbol | |
ID | 7310624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2259602 |
End bp | 2260486 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608836 |
Product | Polyprenyl synthetase |
Protein accession | YP_002506230 |
Protein GI | 220929321 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.267224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA AGGAAAAAAA CAATATATAT GTGAATATGA TTGAAGAGAG GCTTCATAAT ATTATTCCGG AAGTAGACGA ATACTGTCTT GATATAGAGC AAGCAATGTC CTACAGTCTT TTAGCCGGAG GCAAGAGATT GAGGCCTGTA TTGGCACTTG CTGTTGCTGA AATGTTTGAT AAGCCTTTTG ATGAAGTAAT TAATTTTGGC TGTGCGATTG AAATGATCCA TACATATTCA CTGATACATG ATGATTTGCC GGCTATGGAT AATGATGATT ATAGAAGGGG TAAGCTGACG AACCATAAGG TATTCGGAGA AGCCATGGCA ATACTTGCCG GAGATGGATT ATTGAATATG GCTTATGAGA TAATGATTAA TGATGCGGTT GAATCAAGGA ATATTGAAAA AATGCGGGCT GCCGGAATAG TCGCGAAGTA TGCAGGGGCA TTAGGGATGG TTGGAGGTCA GGTAATTGAT CTTCAATCAG AAGAAAAAAC CATTGAAAGT GATAGACTCA AAACAATGCA CAGACTAAAA ACAGGTGCGT TGATAAAAGC CCCGGTGGAA GCTGCGGCAG TAATATGCGG TGCCGATAAA AAGGAATTTG AGCTTTTGTC AGGATATGCT GCAAATTTGG GATTAGCTTT TCAGATAAAG GACGATATCC TGGACATCGA AGGAACCGTT GAAAACATGG GTAAGAACCC GGGTAATGAT TCTTCATGCC ATAAATCAAC TTATGTAACC ATGTATGGAC TTGAAGAATC CAAAAAGCTA CTGCAAACAG TAACTCAAGA AGGTATTTCC TGTCTGGATG CCTTCGGCGA TAAGGGACAG TTTATGAAAG AACTTGCATT ATCATTGACT GTAAGGGACA GATAA
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Protein sequence | MNFKEKNNIY VNMIEERLHN IIPEVDEYCL DIEQAMSYSL LAGGKRLRPV LALAVAEMFD KPFDEVINFG CAIEMIHTYS LIHDDLPAMD NDDYRRGKLT NHKVFGEAMA ILAGDGLLNM AYEIMINDAV ESRNIEKMRA AGIVAKYAGA LGMVGGQVID LQSEEKTIES DRLKTMHRLK TGALIKAPVE AAAVICGADK KEFELLSGYA ANLGLAFQIK DDILDIEGTV ENMGKNPGND SSCHKSTYVT MYGLEESKKL LQTVTQEGIS CLDAFGDKGQ FMKELALSLT VRDR
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