Gene Ccel_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1858 
Symbol 
ID7310581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2211367 
End bp2212245 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content42% 
IMG OID643608789 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_002506186 
Protein GI220929277 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0762348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA GATATCAATT AAACAAAAAT CTTGCCCAAA TGCTAAAGGG CGGAGTAATC 
ATGGATGTAG TAAATGCCAA AGAAGCAGAA ATTGCACAAA AAGCCGGAGC CGTTGCAGTA
ATGGCTCTCG AAAGAGTTCC TTCCGATATA AGAAAAGCCG GAGGAGTTGC AAGAATGTCC
GATCCAAAAA TGATAAAAGA TATACAAAGT GCCGTATCAA TTCCTGTTAT GGCCAAAGTT
AGAATAGGAC ATTTTGTTGA AGCACAGGTT CTTGAAGCCC TTTCAATTGA CTATATTGAT
GAAAGCGAGG TTTTAACTCC GGCAGACGAA GAATTTCACA TAGATAAGCA TACCTTCAAG
GTTCCATTTG TATGCGGTGC AAAAAATCTC GGAGAAGCTC TCAGAAGAAT TAGTGAAGGT
GCATCCATGA TAAGAACTAA AGGTGAAGCC GGTACAGGAA ATGTTGTTGA AGCCGTCCGA
CATATGAGAA CTGTAACAAA TGAAATCAGA AAGGTGCAGA GTGCATCCAA GCAGGAACTT
ATGACCATAG CAAAAGAATT TGGTGCTCCA TATGACCTTA TTTTATATGT TCACGAAAAC
GGTAAGCTTC CTGTTATAAA CTTTGCAGCA GGCGGAATCG CAACTCCCGC CGATGCGGCA
TTAATGATGC AGCTTGGATG CGACGGCGTA TTTGTTGGTT CGGGAATATT TAAATCCTCA
GATCCAGCCA AAAGAGCAAA GGCAATCGTA AAGGCAACTA CATACTATAA TGATCCGCAA
ATCATTGCAG AGGTCTCTGA AGAGCTTGGT ACTGCCATGG ATTCCATAGA TGTAAGAGAG
TTAACAGGCA ACAGTCTGTA TGCCTCTAGA GGATGGTAA
 
Protein sequence
MNERYQLNKN LAQMLKGGVI MDVVNAKEAE IAQKAGAVAV MALERVPSDI RKAGGVARMS 
DPKMIKDIQS AVSIPVMAKV RIGHFVEAQV LEALSIDYID ESEVLTPADE EFHIDKHTFK
VPFVCGAKNL GEALRRISEG ASMIRTKGEA GTGNVVEAVR HMRTVTNEIR KVQSASKQEL
MTIAKEFGAP YDLILYVHEN GKLPVINFAA GGIATPADAA LMMQLGCDGV FVGSGIFKSS
DPAKRAKAIV KATTYYNDPQ IIAEVSEELG TAMDSIDVRE LTGNSLYASR GW