Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1858 |
Symbol | |
ID | 7310581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 2211367 |
End bp | 2212245 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643608789 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_002506186 |
Protein GI | 220929277 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0762348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGA GATATCAATT AAACAAAAAT CTTGCCCAAA TGCTAAAGGG CGGAGTAATC ATGGATGTAG TAAATGCCAA AGAAGCAGAA ATTGCACAAA AAGCCGGAGC CGTTGCAGTA ATGGCTCTCG AAAGAGTTCC TTCCGATATA AGAAAAGCCG GAGGAGTTGC AAGAATGTCC GATCCAAAAA TGATAAAAGA TATACAAAGT GCCGTATCAA TTCCTGTTAT GGCCAAAGTT AGAATAGGAC ATTTTGTTGA AGCACAGGTT CTTGAAGCCC TTTCAATTGA CTATATTGAT GAAAGCGAGG TTTTAACTCC GGCAGACGAA GAATTTCACA TAGATAAGCA TACCTTCAAG GTTCCATTTG TATGCGGTGC AAAAAATCTC GGAGAAGCTC TCAGAAGAAT TAGTGAAGGT GCATCCATGA TAAGAACTAA AGGTGAAGCC GGTACAGGAA ATGTTGTTGA AGCCGTCCGA CATATGAGAA CTGTAACAAA TGAAATCAGA AAGGTGCAGA GTGCATCCAA GCAGGAACTT ATGACCATAG CAAAAGAATT TGGTGCTCCA TATGACCTTA TTTTATATGT TCACGAAAAC GGTAAGCTTC CTGTTATAAA CTTTGCAGCA GGCGGAATCG CAACTCCCGC CGATGCGGCA TTAATGATGC AGCTTGGATG CGACGGCGTA TTTGTTGGTT CGGGAATATT TAAATCCTCA GATCCAGCCA AAAGAGCAAA GGCAATCGTA AAGGCAACTA CATACTATAA TGATCCGCAA ATCATTGCAG AGGTCTCTGA AGAGCTTGGT ACTGCCATGG ATTCCATAGA TGTAAGAGAG TTAACAGGCA ACAGTCTGTA TGCCTCTAGA GGATGGTAA
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Protein sequence | MNERYQLNKN LAQMLKGGVI MDVVNAKEAE IAQKAGAVAV MALERVPSDI RKAGGVARMS DPKMIKDIQS AVSIPVMAKV RIGHFVEAQV LEALSIDYID ESEVLTPADE EFHIDKHTFK VPFVCGAKNL GEALRRISEG ASMIRTKGEA GTGNVVEAVR HMRTVTNEIR KVQSASKQEL MTIAKEFGAP YDLILYVHEN GKLPVINFAA GGIATPADAA LMMQLGCDGV FVGSGIFKSS DPAKRAKAIV KATTYYNDPQ IIAEVSEELG TAMDSIDVRE LTGNSLYASR GW
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