| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1802 |
|---|
| Symbol | |
|---|
| ID | 7310533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2156609 |
|---|
| End bp | 2157448 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643608734 |
|---|
| Product | aminotransferase class IV |
|---|
| Protein accession | YP_002506132 |
|---|
| Protein GI | 220929223 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0674484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTG AAGAAAACAT AGGTACAAAC TGTATTATTA ACGGGGAGAC TTTACCGTCT
GATGCACTTA ATCAATATTC AGATGAAAAA TATTCAGCTT GTTATGAGGT TATACGCATA
ATTAAAGGTA CTCCGCTGTT TTATGATGAC CACTTTTCAC GTCTTAAAAG TTCTGTACAA
AAGACTCAAA ATGAACTGGA AATCACAAAA AGGGATTTGA AGGCTCAAAT TCATAAGATA
TGTGAACTTA ATAAATTTAC AGACTGCAAT GTAAAAGTAT TGGTACTTCT CTACGAAAAA
GAGCAGATTA CATTGTTGCA CATAAACAAA TTCTACTACC CTTCACAAGA GGAATATGAT
AGTGGCGTAA AAAGCTGTAC CGTTAAGCTC AGCAGGAATA ATCCAAGTAT AAAAATGGTG
AATACTTCAT ATAAAGCAGA AGTAAAACGT GTTGCAGAAG CAAATGGTGC TTTTGAAGTA
CTTTTGGTAA ACGATAGCAA TAGGATAACA GAAGGCGGAA AATCCAATGT TTTTTTTGTG
AAAGGTGACA AAATTTACAC ATCTCCCGAA GAATATATAC TCAAAGGTAT TACTAGACAA
TATATAATCG ATGTTTGCGT AAAACTGGGT TACGAAGTCA TAGAAACATT GATTAGTGTC
GAACAGCTAA GTAATTTTGA TGCAGCTTTT ATAACAGGTA CATCCATTAA TGCAATGCCA
TTAAAAATAA TAGACAGCTG CTTATTGAAT TCTGCTGAAA ATGCTGTAAC CCAAAATGTG
ATGAAAGGCT ATAACAGCCT TGTATCGGCA TATATTGAGA GTAATCGAAA TAAGAATTAA
|
|---|
| Protein sequence | MTFEENIGTN CIINGETLPS DALNQYSDEK YSACYEVIRI IKGTPLFYDD HFSRLKSSVQ
KTQNELEITK RDLKAQIHKI CELNKFTDCN VKVLVLLYEK EQITLLHINK FYYPSQEEYD
SGVKSCTVKL SRNNPSIKMV NTSYKAEVKR VAEANGAFEV LLVNDSNRIT EGGKSNVFFV
KGDKIYTSPE EYILKGITRQ YIIDVCVKLG YEVIETLISV EQLSNFDAAF ITGTSINAMP
LKIIDSCLLN SAENAVTQNV MKGYNSLVSA YIESNRNKN
|
|---|
| |