Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1800 |
Symbol | |
ID | 7310531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2154462 |
End bp | 2155508 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643608732 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_002506130 |
Protein GI | 220929221 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.478668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTACTTG ACGATAGAAA ATTGAAAATA TTGCAAGCAA TAATAGATGA TTATATATAC TCGGCTGAAC CTGTTGGGTC CAGAACTATT GCCAAGAAGC ATGAACTTGG TTTAAGTTCG GCTACCATAA GAAATGAAAT GGCTGATCTT GAGGAAATGG GGCTTTTGGA ACAGCCATAT ACATCAGCAG GCAGGATTCC TTCTGATAGA GGGTACAGGC TTTACGTTGA CCAGCTGATG AAGATAGATG AATTGAACGA ATGTGAAATT GAAAAAATCC GAAGTGATAT GAACATAAGA ATAAATGAAC TTAGTCAGCT AATTAGGAGT GCTTCGGCGG TTATGGCGAA AATTACCAAA TATACTTCTA TGGCGGTATC ACCTCATATG AAAAAGAGTG TACTTAAATC TGTTCAGGTA GTGCCGATAG AGTCGGGAAA GGCATTGGTA ATTATTGTTA CAGATGCAAA TATTGTAAGA AATAACTTGA TCAGAATTCC TGAAAGTGTT ACTCCCGCTT TCTTGATTCA GATTTCAAAT ATGCTTAACG AACAGCTTAA AGGGTTTACT CTGGAAATGC TGAAATCAGA CATTTTAAAT GAAAAGTTTG AAAAACTAAC AGCATTACCT TTTAGGTTAA TAAAACCCAT TCTCGATGGA ATAGAGGAAT TGATTATAAC TATTGATAAC CCAGAAGTAT ATCTTGAAGG TGCTACAAAT ATTCTTAATT TTCCTGAGTT TAAAGAGGTT GATAAGGCTA AGGAGTTTTT GAATATATTA GACGAAAAGA AACTTGTATC TGACCTTCTA ACGAATAGTG TAAATGATAA TAACGAAATA ATTATTCACA TAGGAAATGA GAATGCTATG GAAGGTATAA AAGATTGTAG CTTGGTTACT GCTTCGTACA GTGTCGGTAA TCATGTAATA GGAACAATAG GTATTATTGG CCCAACCAGA ATGGAGTATT CTAGGGTTGT GTCATCTATG AACTATATAA GGAATAAAAT CAATCAGGAG ATTCTTAAAC TTCTGGATAA TGGATAG
|
Protein sequence | MLLDDRKLKI LQAIIDDYIY SAEPVGSRTI AKKHELGLSS ATIRNEMADL EEMGLLEQPY TSAGRIPSDR GYRLYVDQLM KIDELNECEI EKIRSDMNIR INELSQLIRS ASAVMAKITK YTSMAVSPHM KKSVLKSVQV VPIESGKALV IIVTDANIVR NNLIRIPESV TPAFLIQISN MLNEQLKGFT LEMLKSDILN EKFEKLTALP FRLIKPILDG IEELIITIDN PEVYLEGATN ILNFPEFKEV DKAKEFLNIL DEKKLVSDLL TNSVNDNNEI IIHIGNENAM EGIKDCSLVT ASYSVGNHVI GTIGIIGPTR MEYSRVVSSM NYIRNKINQE ILKLLDNG
|
| |