Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1789 |
Symbol | |
ID | 7310521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2144886 |
End bp | 2146274 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643608721 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_002506119 |
Protein GI | 220929210 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.143948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAGCTG AAAAGACAAT GGAAAAAATA GTTGCATTAG CTAAAAACAG AGGTTTTGTT TACCCTGGTT CCGATATATA CGGAGGACTG GCAAATGCAT GGGACTACGG TCCTCTTGGC GTGGAACTAA AGAATAATGT AAAAAAAGCA TGGTGGCTTA AGTTTATACA GGAAAGTCCA TACAATGTGG GAGTTGATTG TGCAATACTT ATGAATCCGC AGGTTTGGGT GGCGTCAGGC CATGTAGGCG GTTTTAGTGA TCCTTTGATA GACTGTAAGG ATTGTAAAAC CCGTCATAGA GCAGATAAGC TTATTGAAGA CTGGAATAAC GAAAACAATA TTGAATTCAG AGTAGATGGT CTGAAAAATG AAGAATTGAT GCAATACATA AAGGATAAGG GTGTCAGATG CCCTAGTTGC GGATCTGCAA ACTTCACTGA TATCAGAAAG TTCAACCTTA TGTTCAAGAC TTTTCAGGGA GTTACCGAAG ACTCCAAGTC TGAAATATAT TTGAGACCTG AAACAGCACA AGGTATTTTT GTTAATTTTA AGAACGTTCA GCGTACAACT AGAAGAAAAA TACCCTTTGG TATCGGTCAG ATAGGTAAGT CCTTTAGAAA TGAAATAACA CCGGGTAATT TTACATTCAG AACCCGTGAA TTTGAACAGA TGGAGCTTGA ATTCTTCTGT GAACCCGGAA AAGACCTTGA GTGGTTTAAA TATTGGAAAG ATTTTTGTTA TAACTGGCTC CTGAGCCTGA ATATGAAAAA GGAAAACTTG AAACTTCGTG ACCACGAAAA AGAAGAACTT TCACATTACA GTAATGCAAC TACTGATATT GAGTTCTTGT TTCCTTTTGG TTGGGGAGAA CTTTGGGGAA TTGCAGACAG AACAGATTTT GACCTGAAAC AGCATATGAC TCATTCAAAA GACGACTTGT CATACTTTGA TCCTACTACA AATGAGAAGT ATGTTCCATA TTGTATAGAA CCATCCTTGG GTGCTGATAG AGTTACCCTT GCGTTCCTTT GTGAAGCATA TGACGAAGAA GAGGTTGCAG AAGGCGATGT AAGAACTGTT TTAAGATTCC ATCCTGCACT GGCACCTGTA AAGATAGCTG TTCTTCCTTT ATCAAAGAAA CTGGGTGAGG ATGCTGACAA GGTTTATCAG ATGCTGGCTA AGAGCTATTA CTGCGAGTAT GATGAAACAG GAAGCATAGG TAAGAGATAC AGAAGACAGG ATGAGATAGG AACACCATAT TGCATTACCT TTGATTTTGA TTCACTTGAA GACAAGAGTG TTACTATCAG AGACAGAGAT ACCATGCAGC AGGTAAGAAT TAAAATTGAA GATCTTGCAG CATATTTTGA AAATAAATTT GAATTTTAA
|
Protein sequence | MAAEKTMEKI VALAKNRGFV YPGSDIYGGL ANAWDYGPLG VELKNNVKKA WWLKFIQESP YNVGVDCAIL MNPQVWVASG HVGGFSDPLI DCKDCKTRHR ADKLIEDWNN ENNIEFRVDG LKNEELMQYI KDKGVRCPSC GSANFTDIRK FNLMFKTFQG VTEDSKSEIY LRPETAQGIF VNFKNVQRTT RRKIPFGIGQ IGKSFRNEIT PGNFTFRTRE FEQMELEFFC EPGKDLEWFK YWKDFCYNWL LSLNMKKENL KLRDHEKEEL SHYSNATTDI EFLFPFGWGE LWGIADRTDF DLKQHMTHSK DDLSYFDPTT NEKYVPYCIE PSLGADRVTL AFLCEAYDEE EVAEGDVRTV LRFHPALAPV KIAVLPLSKK LGEDADKVYQ MLAKSYYCEY DETGSIGKRY RRQDEIGTPY CITFDFDSLE DKSVTIRDRD TMQQVRIKIE DLAAYFENKF EF
|
| |