Gene Ccel_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1687 
Symbol 
ID7310430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2030516 
End bp2032108 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content38% 
IMG OID643608615 
ProductNADH dehydrogenase (ubiquinone) 30 kDa subunit 
Protein accessionYP_002506018 
Protein GI220929109 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCGG CAGCTATATT GGATACTATA AAAAGATTGT TATCCTCTCA TATACTTGAA 
AGCAGACTTA TTAATGAAAA TGAAATTTAC TTTTGCATTT CTCCCTCCAC TGTGAAGGAG
GACTGCATTA ATGTATATAA AAATATTGAA TGTGTGCTTG TTGGCTTATT TGCTAATGAT
ACTACACCGA TTGACAATAA GCTTACAGTA TATTACACAT TTGCAGTAAG ATCATCAAAC
ACGTTAATTA CATTGTATTC AAAGCTTGAG AATGACGGCT CAGCTAAGGT TGATTCCATA
GCTTTGGAAG TTCCGGCTGC AAGCTTGTAT GAGCGTGAGA TTCATGATAT GTACGGAATA
GTATTTGAAG AATTACCTGA CAGTAGGGAG CTGGTTCATC ACGGTAATTT TCCGCTAGAC
GTTCACCCTT TGAGGAGGAA CTTCAAATCC AATACCCATC TTCCGTTTCA GCAGCGTGAG
TTAGAATTCT CAACTATTAC TGGCGAGGGT GTTTTTGAAG TGCCTGTAGG GCCTGTTCAT
GCGGGTATTA TCGAACCGGG CCATTTCCGA TTCAGCGTGG CAGGTGAACC AATAATAAAT
CTTGAAGCAA AGCTCTATTA TGTACATCGT GGTCTTGAGA AACTTTGTGA AAACCAGCAT
TATATGAAGG TTCTTTTGTT TTCGGAAAGA ATTTCAGGGG ATGAGACATT TACAAATTCG
CTGGCTTTCT GTCAGGCAAT TGAAAAGCTC AATGGTATCA CATATATTCC GGAACGTGCA
GTATATTCGA GAGTACTATT TGCTGAACTT GAACGTATAT GCGGACATCT TGGGGATATA
CAAGGACTGT GTGTAGATAC GGCTTATATA TTTCCATCAG GCCAGTTTGC AATGATGAGG
AGATGGATAC AACTTCTGAA TGAACAACTT ACAGGCAGCA GATTTCTCAG AAACACCAAT
AAGCCCGGTG GTTTAAGACG TGACTTTGTA CGTAGCAATG AGAAGATTAT TCTAGAATGC
ATTAACAAGC TGGATAAGGA ATTTAAGGAA ACAGTAGCTA TTATAAAAAA TAACGGAATG
TTTATAGATA GGGTAGAGCA CACCGGAATA CTTGAGAATT CCATTGCAGT CGATTTGAAT
GTTGTTGGAC CAGGAGGAAG AGCCAGCGGT GTAAAAACCG ATGTGAGAAA GGAATTTCCA
TACGCTGCAT ATTCCAAACT AAAATTTAAT GTTCCAGAGC ATAGTAATTG TGACGTTAAC
TGTAGAATGA ATGTAAAAAT AGAAGAAGTA ATCGAGTCTA TAAATATTAT AAAGCAGGTA
TTGGAAAAAA TGCCTGAGGA GGGACCTGTA TCTGTTGATA TAGGAGAACT AAAGCCATAC
TCCTATGCGT TCGGAATGAC AGAGTCTCCG AGAGGTGAAA ATTTACATTT TGTAATGACA
GGTGAAAATA ACACTATTTT CCGCTATAAA GTAAGAACAC CGTCCTTCTG TAATTGGCCC
GCTCTTTGCC ATGCAGTAAA TACTAATACT TTGACGGACT TCCCGTTGAT AAACAAAAGC
TTTAATCTCT CATATGCGGG TAACGATTTA TAA
 
Protein sequence
MVSAAILDTI KRLLSSHILE SRLINENEIY FCISPSTVKE DCINVYKNIE CVLVGLFAND 
TTPIDNKLTV YYTFAVRSSN TLITLYSKLE NDGSAKVDSI ALEVPAASLY EREIHDMYGI
VFEELPDSRE LVHHGNFPLD VHPLRRNFKS NTHLPFQQRE LEFSTITGEG VFEVPVGPVH
AGIIEPGHFR FSVAGEPIIN LEAKLYYVHR GLEKLCENQH YMKVLLFSER ISGDETFTNS
LAFCQAIEKL NGITYIPERA VYSRVLFAEL ERICGHLGDI QGLCVDTAYI FPSGQFAMMR
RWIQLLNEQL TGSRFLRNTN KPGGLRRDFV RSNEKIILEC INKLDKEFKE TVAIIKNNGM
FIDRVEHTGI LENSIAVDLN VVGPGGRASG VKTDVRKEFP YAAYSKLKFN VPEHSNCDVN
CRMNVKIEEV IESINIIKQV LEKMPEEGPV SVDIGELKPY SYAFGMTESP RGENLHFVMT
GENNTIFRYK VRTPSFCNWP ALCHAVNTNT LTDFPLINKS FNLSYAGNDL