| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1654 |
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| Symbol | xerC |
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| ID | 7312262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1994805 |
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| End bp | 1995797 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643608582 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_002505985 |
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| Protein GI | 220929076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000234006 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACA TTTTTGATTT TGAAATGCCT TTGGTTTTAA AGGATTTTTT AAACTATCTT
CAGACTATAA AGGGTAAATC TAAAAACACT ATACAGGTTT ATTTCTATGA TCTTAGAATT
TTTTTACGTT TTCTTAAAAT ACATAGAAAT TTAGTGGATA AAAACATCGA ATTTAATAGC
ATAGATATTA CGGATGTTGA TATATCTCTA TTAAAGACGG TTACACTCAG TGATTTATAT
ACGTATATGT CCTTTGTCAG CAATAAAAGA GATAATACAT CTCATGCACG TGCAAGAAAG
GTTGCCAGTC TTAAATCTTT TTTTAACTAC CTATCGACAA AGGCAAAGCT CCTGGATATA
AACCCTACCA TAGAACTGGA ATCTCCAAAG ATATTAAAGA GACTGCCCAG ATATCTTAAT
TTTGATGAGA GCAAAAAACT CTTAACCTCT GTAAATAAAG CAGATCACGA ATATGCAATC
AGAGACTACG CAATAATTAC AATTTTTCTA AACTGTGGAA TTCGTCTTTC GGAGCTAGTT
GGAATTAATC TGCACAACAT AAAGGACAAC ACGCTTATAG TATTCGGCAA GGGCGGAAAA
GAACGCAGCA TCCCTTTGAA TAGAGCATGT CTTCAGGCTA TAGACGACTA CTTGAAGGTA
CGTCCTGTTA ATGGATTGAA AGACAAAAGT GCTTTATTTA TAAGCAGAAG AAATCAGCGT
ATCAGCAAGG AATCGGTACA GAAAATTGTT AAAAGGTACA TAACAGAAGC CGGGTTGGAT
CCCCAACGTT ATTCTACCCA CAAACTGAGA CATACCGCAG CAACTCTGAT GTATAAATAC
GGGAACGTTG ATATCAGGGC TTTACAGGAG ATACTTGGCC ATGAAAGTAT TTCTACTACC
GAAATATATA CCCATCTGGA TCAGCAGCAG CTAAAGGAAG CTGTAGATAA ACACCCCCTT
TCAGATTTCG GTGTTGTAAA ACAAAGTAAA TAA
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| Protein sequence | MKNIFDFEMP LVLKDFLNYL QTIKGKSKNT IQVYFYDLRI FLRFLKIHRN LVDKNIEFNS
IDITDVDISL LKTVTLSDLY TYMSFVSNKR DNTSHARARK VASLKSFFNY LSTKAKLLDI
NPTIELESPK ILKRLPRYLN FDESKKLLTS VNKADHEYAI RDYAIITIFL NCGIRLSELV
GINLHNIKDN TLIVFGKGGK ERSIPLNRAC LQAIDDYLKV RPVNGLKDKS ALFISRRNQR
ISKESVQKIV KRYITEAGLD PQRYSTHKLR HTAATLMYKY GNVDIRALQE ILGHESISTT
EIYTHLDQQQ LKEAVDKHPL SDFGVVKQSK
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