| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1646 |
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| Symbol | |
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| ID | 7310395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 1984068 |
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| End bp | 1985921 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643608574 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_002505977 |
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| Protein GI | 220929068 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.177984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAC TGATAAATAA GCTTACAAGA CTTAGTCTGG TATGGCAGGT TACTATTGTT
TTCTCACTTA TAATGATAAT TCCTGCAATT GTGATAACCA CATCGTACTT TGAAATTGTC
AGAGATAATC TTTTGGAGGA AGCAAATAAA AAGGTACAGG AGAATTTAAA AAAACTGGAT
AGTAACATAA ATTCCAATAT CAGTGACATG AACAGTGCAC TGAATCAATT GGTTTTCAGT
CAGGAATTTC AGTATTATTT AAATCCTGAA AATAATCTAA GCACGCATGA AAAGAATTAT
TATGTCTACA GTGTTCAAAA TGAACTTTTA AATATACGTT ATGTATATAC CAATCAATTC
AACAGACTTG TTATATATTC TTCGAATAAT CAGATTGATG AGTATTTCGA CTGGTCATAT
CACATGGAAA GATTATATGA CCGTGATTAT TATTCTGAAA TAATGCAAAG CAGCAGTGAA
CATATATATG GAAATGTACG TGTATATGAC AGATCCTTAG GAAACCTTGT AAATTATGAA
GAGCTTGAAA ATAAGGAAGA ATTGGTATTA CCCATTTATC AAAAAATATT AGATATTCGC
ACCAAGCAAT GCATCGGAAT AATTGAAGTC GATATGACAA TGAGCAAGCT TGCTGATTCA
AGCAAACTTA TAGATCAGGA TTCAGAAGTG AAATATTTGA TTTTTGATCG TAACCAAAAA
TTGGTTTTCA CCTCGGACGA TAAAAGTAAG GGAGAATTTG CCACTATAAA ATTTCCTCAA
GAATCAGGTG TATCGGATAT TAAAATCGGG GATGCAGATT ATTTAATTGC GTATTATAAG
GATGATATTA CGGGTCTGAC CAGTGCTGCC GTAATGGACA AGAAGAAAAT TCTTGCTTCC
ACTTCAGGAG TTGCTACCCT TCTGCTTTTG ATTGCCATTC TCAGTATTGT GTTTATTATA
CTTTTTACCA ATGTAGCAGC GAGAGTATTC TTCAGAAAGC TTAAAGAAAT TGATAGAATG
ATTACACATA TTGAAGCTGG ACAGTTTGAT GTACGGATTA AAGTGGGTGG ATTTAATGAA
ATTTCCAGGA TTTCAGAGAG CTTTAATCAT ATGGCTGAAA GACTTCAAGG ATTGCTTGTT
TCAATGGTCC AAAAGGAAAA AGCACAGAAA GAGGCGGAAA TACATGCCCT TCAAGCACAA
ATAAATCCGC ATTTTCTCTA TAATACTCTG GAAAATATGA GAATGCAGTG TGAAATAGAC
GATTATTATG TAGTGGCAGA CAAACTGGAA AATTTGGGTG ATTTACTGCG TTACAGCCTG
CATTGGGAAA GCCCCAAAGT AAAAATAAGT GAAGAACTCA ATAATATTGA ACAGTATATA
GAGATTATGA GAATGCGATT TAATAAAAGA CTGACCCATC AAATAGAATG TCCCGAAAGC
TTAAAGAATA TTATGATCCC TAAACTGATA CTCCAGCCAT TGGTTGAAAA TTGTTTTACA
CATGGCTTTA AAGATTCTCT TCCTCCATGG AAGATATTTG TTAATGTTTC TATAGTAGAA
AACAAGCTGA GCATAACTGT TGAAGATAAT GGCGTGGGAA TTGGAAATGA ACGTCTTGAA
GAAATCTATA AATGTATCGC GGAAAATAAG ACTATTTACA ATAAAAATAA GTCTAAAAAC
TCAATAGGTA TTCTTAATGT AAGTCAACGT CTGAAGATGA TTTGTCCTGC TGGAAGCGGA
ATGTACATTG AGAGTGAACA GAATGTCGGA ACCAAAATTA TTCTAACCAT TATTATTGAA
TCGGGTGTTC AAAACGGAGG GGAAGAAGAT GTTCAAAATA TTGGTGGCAG ATGA
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| Protein sequence | MKTLINKLTR LSLVWQVTIV FSLIMIIPAI VITTSYFEIV RDNLLEEANK KVQENLKKLD
SNINSNISDM NSALNQLVFS QEFQYYLNPE NNLSTHEKNY YVYSVQNELL NIRYVYTNQF
NRLVIYSSNN QIDEYFDWSY HMERLYDRDY YSEIMQSSSE HIYGNVRVYD RSLGNLVNYE
ELENKEELVL PIYQKILDIR TKQCIGIIEV DMTMSKLADS SKLIDQDSEV KYLIFDRNQK
LVFTSDDKSK GEFATIKFPQ ESGVSDIKIG DADYLIAYYK DDITGLTSAA VMDKKKILAS
TSGVATLLLL IAILSIVFII LFTNVAARVF FRKLKEIDRM ITHIEAGQFD VRIKVGGFNE
ISRISESFNH MAERLQGLLV SMVQKEKAQK EAEIHALQAQ INPHFLYNTL ENMRMQCEID
DYYVVADKLE NLGDLLRYSL HWESPKVKIS EELNNIEQYI EIMRMRFNKR LTHQIECPES
LKNIMIPKLI LQPLVENCFT HGFKDSLPPW KIFVNVSIVE NKLSITVEDN GVGIGNERLE
EIYKCIAENK TIYNKNKSKN SIGILNVSQR LKMICPAGSG MYIESEQNVG TKIILTIIIE
SGVQNGGEED VQNIGGR
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