Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1645 |
Symbol | |
ID | 7312261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1982513 |
End bp | 1984093 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643608573 |
Product | two component transcriptional regulator, AraC family |
Protein accession | YP_002505976 |
Protein GI | 220929067 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.168722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAAA TATTGGTGGC AGATGATGAG GATGTTATAA GAAAGGGTAT AGTCGTAATA CTCAAAAGGG AGCTGGCGAA CATTGATATT TGTTGTATTG AGGCTGAAAA TGGTATAGAA GCACTTAAAC TCTGCAAAGA ACATTTACCT CAGCTTGTCA TTACCGATAT CCGGATGCCT TTCTGTGATG GGCTTAATTT AATTAAGAAT ATAAAGGAAA CAGGGTATTC TCCAACTTTT ATCATTCTTT CAGGATATGC AGATTTTGAA TATGCAAAGT CTGCCATTAA GTTAGGTGTT AAAGAATATG TACTTAAGCC TATTAAAAAG CATGAACTTG TTTCTATGGT TGAGGGTTAT GTAAAAAGCT TGGCTAATGA GAAACAGAGA ATAGACGAAA AATTTGCCCG TGAAAGTGAA AATAAGAAGG TTGTAGAAAA TGTAAAGCAA AAGCTCCTTA GAAGCTTACT TGATTCCACT GATGCAGAAG AGTCAAATAG ATGCCTGACC GAGCTTTATG ATTTGGGTAT CCACTTTAGT GAAAAGCTTT TACTCTGTGC AATCATACAA TACCAGGTGA ATAATGAAAA CAAAGACTAT ATTGATTTTG CAGTAAAAAA CATAGCAGAT GAAGTTTTGA CCCAGAAAAT GGGTAAGGAT TTCTTGATTA CAGTTCAATA TGAATCAGGC AGACTTGCTG CTGTTTTTGA AGGACTTAAA AGAGAGACAA TGTTCCTTTC AGTAAAGCAG GAGCTAAATA AGATCTGCAA TCTGGTTCGC AAGTACCTGA TGGTAGATGT TTTTGCCGGT ATTGGTGATG CCGTCTATGG CTCTACATTA TTGCATAAAA CCTTTAATTT TGCCAACATG GCTACCAATT ACAAATTGTA TCGTACAGGT AACAGTGTAC AATTATTCTC GGAGATACCT ATGTCATTGA GGTATGAACA GATTGATTGG GGTAATTTAA TCCGCCCCCT TAAGAATATT AATAATGCAG AAATTATTAA TTCTTTTGAA AAACTGATTA GGTTAACCCC TTCACTACAG TCTCTGTCAG TTATTGAGCA AAGCTATACA AAACTTGTTG ATAGTATTAA CCGTCAGCTT GTTAAGTATA ACAGCACAAG GACGGAAAGT ATTATTAAGC CTCTTCCCTT TTTTGAGCTC TGGAGTTTTT TACAGCTTAA ACAGGAGATT AACAGATATC TCAATCAAGT GTGTCAGGCA GCTGATGAGG CCGGGATAGA TGTACCTAAT AAAAAGCTTA TAGTAGAGGT ATTGCAATTT GTCAGGGAAA ATGCCGCCAG TGATATCAAT TTAAATATAG TAGCGGAAAA ATTTGATCGT ACTCCGGCGT ATATGAGTGC TTTATTCAAA AAAGGTACCG GAATGGGTTT CAATGAATAT ATTACCAGCA TCCGTATGGC TATGGCTAAA AAGCTGCTTG CCGACACAAG CATTCCTATA GGTGAGGTAA GTGGTCTTTG TGGATATATA AACCCCAAGT ATTTTTCTGT AGTGTTTAAA AATACTTTTG GTGTAAGCCC GGTTGTATAC AGGCAAAACT CTATGCATTA A
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Protein sequence | MFKILVADDE DVIRKGIVVI LKRELANIDI CCIEAENGIE ALKLCKEHLP QLVITDIRMP FCDGLNLIKN IKETGYSPTF IILSGYADFE YAKSAIKLGV KEYVLKPIKK HELVSMVEGY VKSLANEKQR IDEKFARESE NKKVVENVKQ KLLRSLLDST DAEESNRCLT ELYDLGIHFS EKLLLCAIIQ YQVNNENKDY IDFAVKNIAD EVLTQKMGKD FLITVQYESG RLAAVFEGLK RETMFLSVKQ ELNKICNLVR KYLMVDVFAG IGDAVYGSTL LHKTFNFANM ATNYKLYRTG NSVQLFSEIP MSLRYEQIDW GNLIRPLKNI NNAEIINSFE KLIRLTPSLQ SLSVIEQSYT KLVDSINRQL VKYNSTRTES IIKPLPFFEL WSFLQLKQEI NRYLNQVCQA ADEAGIDVPN KKLIVEVLQF VRENAASDIN LNIVAEKFDR TPAYMSALFK KGTGMGFNEY ITSIRMAMAK KLLADTSIPI GEVSGLCGYI NPKYFSVVFK NTFGVSPVVY RQNSMH
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