Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1643 |
Symbol | |
ID | 7310394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1979837 |
End bp | 1980799 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608571 |
Product | inner-membrane translocator |
Protein accession | YP_002505974 |
Protein GI | 220929065 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000313624 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATA TAAAAAATTA CAGAAAAATG ACTGCAGGTC AGTTTTTAGA GAAATTTGCG ACATTGATTG GACTGTTTTT GGTTATATTG ATTTTTGCTT TACTAAAACC CAAATTCCTT GATGTAAACA ATGTTTTTAA CCTGTTAAGA CAGGCATCCA TAAATGGCTT ACTTGCCCTT GGAATGACAT TTGTAGTGTT AACAGGGGGA ATTGATCTCT CCGTCGGCTC AATATTGGGT GCATCTGGAA TATTTGCAGC ACTTGTTGCC CAGAACCATG ATATTCCCTG GTTTGTGGCA GTCTTTGTTG GATTGGGTGT AGGTTTTATA CTTGGAAGTT TAAACGGAAT AGTAATCTCA TGGCTAAAGG TTCCGGCTTT TGTTGCTACG TTGGGAATGT TGAGCGTCGC CAGAGGAATT ACTTATCTGG CCAGCAATGC ACAGCCGGTA CCGGGGTTAA GTGAAGGATT TCTGAAAATT GGTGGAGGAA ATGTTGGAAT TATACCAATC CCAGTTATTA TCCTTGCAGT AGTATTTATT ATTTGCAGTG TTCTTATATA CAAGGCAAAA TATGGAAGAT ACATTTTTGG TGTAGGTGGA AATGCAAAAG CTGCACGTCT ATCAGGTATA AATGTTAAGA AAATCAAGTG GTCAGCATAT ATGATAGCAG GGGTTTTGGC AGGACTTGCG GGTGTAGTAT TGACTTCTCG TGTATCTTCC GGATTGGCAA TGGCCGGACA AAACTATGAG ACAGATGCTA TTGCGGCTGT TGTAATGGGC GGAACCAGTC TGGCAGGCGG TAAAGGAAGA TTATGGGGAA CTCTTGTCGG CGTCCTTATA ATAGCAGTTT TAAATAATGG CTTGGATATG ATGGCTGTAT CATCATACTG GCAGTTAATT ATCAAAGGTT TGATAATTAT TGCAGCTGTT ATGATGGATA GCTTAAACAG TTCTAATGAT TAA
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Protein sequence | MENIKNYRKM TAGQFLEKFA TLIGLFLVIL IFALLKPKFL DVNNVFNLLR QASINGLLAL GMTFVVLTGG IDLSVGSILG ASGIFAALVA QNHDIPWFVA VFVGLGVGFI LGSLNGIVIS WLKVPAFVAT LGMLSVARGI TYLASNAQPV PGLSEGFLKI GGGNVGIIPI PVIILAVVFI ICSVLIYKAK YGRYIFGVGG NAKAARLSGI NVKKIKWSAY MIAGVLAGLA GVVLTSRVSS GLAMAGQNYE TDAIAAVVMG GTSLAGGKGR LWGTLVGVLI IAVLNNGLDM MAVSSYWQLI IKGLIIIAAV MMDSLNSSND
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