Gene Ccel_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1640 
Symbol 
ID7310392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1977420 
End bp1977878 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content40% 
IMG OID643608568 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_002505971 
Protein GI220929062 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000194465 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATAG CTATAGGTTG TGATGAAGCA GGATTTCAAT TCAAGGAAGT AATAAAGAAT 
CTTTTATTAG AAAAAGGGTT GGATGTTGAA GATTTTGGAG TATATAATAC AGACCCTGTG
CTATATCCTG ATATTGCTGT TGCCGTTGCA AAGTCAATAT CTGAAGGAAA ACATGAAAGA
GGGATATTGA TTTGCGGAAC AGGTATAGGA ATGGCCATTG CTGCCAATAA AGTTCCGGGT
ATAAGAGCGG CCGTTTGTCA TGACTCTTTC TCAACTGAAC GTTCCAGAAA AAGCAACAAT
GCACAGATTA TGGCCCTTGG GGCACGTGTA ATCGGAATAG AGCTGGCAAA GCTTCTGGTG
GATTTATGGC TGGAGTGTGA ATTTGGTGGC GGTGGTTCAG AGGCGAAAGT CAATAAAATC
ATGGAGTACG AAAATGAATT TTTAAAAAGT TGTAGATAA
 
Protein sequence
MSIAIGCDEA GFQFKEVIKN LLLEKGLDVE DFGVYNTDPV LYPDIAVAVA KSISEGKHER 
GILICGTGIG MAIAANKVPG IRAAVCHDSF STERSRKSNN AQIMALGARV IGIELAKLLV
DLWLECEFGG GGSEAKVNKI MEYENEFLKS CR