| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1625 |
|---|
| Symbol | |
|---|
| ID | 7310378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 1960884 |
|---|
| End bp | 1962086 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608554 |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_002505957 |
|---|
| Protein GI | 220929048 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTA GTTTTTCAAA AGAACTGCTA CAATTAAAAG CAATGGTAAG TAAGTTTGTT
GACAAGGATC TTGCACCTTT TGCGGCTGAG TATGATAAAA AAGAGAACCC AAAAGATTGC
ATACCATGGT CAATAATAGA AAAGGCAATG GGACTGGGTT TGGGCAGTGC GGCTGTTCCT
AAAGAGTTTG GCGGGAGCGG GCTATCAAGT CTTGAAATAT TGACTATAAT TGAAGAACTT
GCTCGCGGAG ATGCCGGATT TGCTTATACA TTATTATCAA CTATAACTGG AGCACAGTTA
ATAACAAAAT TTGGCACAGA TGAGCAGAAG AATCAATGGT TAACTAAGAT TGCAAATGAC
CAAACCAAAA GATTTTTAAT GGGATTCGCA TTATCAGAAC CTCAAACTGG ATCTGACAAT
ATGTCACCTA ATCCAAATGC GGGTATGTTA ACGACAGCAG AGTTAACTGA TGGTCAGTAC
ATAATAAATG GTACTAAAAG CTTTATTACT AACGCAGGAA TTGCAGGGTT ATACCTTGTT
TGGGCTAGAA CTGACAAATC AAAAGGTGCA CCTCAGGGCG GACTTAGTGT ATTTCTAGTA
CCAGCGGACG CACCCGGTCT TAAAGTAGGG AAAATCGAAG ACAAAATGGG AAATAGATTA
TCACAGCAAG GAGAATTAAT TTTCGAAAAC TGTATAATCC CAGCAAGTAA TTTACTTGGA
AAAGAGGGTA TGGGGCTGCC AGTTTGCTTA GCAATGATTG AAAATCGTTT TTCCACTGTA
GGAGCCATAG GTACAGGTAT TGCACAGGCC GCTTTTAATA TTTCTTATAA ATATGCAAAA
GAAAGAGTTC AGGGTGGAGC ACCTATTATT AACCAGCAAG CAATAAGCCA CAAATTAGCA
AATATACTAA TAGCTATAGA GTCATCAAGG CTGCTATATC AAAAAGCGGC ATGGCATTTG
GATAACATGA TACCTGGTAT GGTAATAGGC TCAATGAGCA AAGTAGCGGG ATCAGAGGCT
GCAATCATGG CATCAAATGA GACAATACAA ATTTTAGGAT GTTATGGTTA TTCAAGAGAA
TACCCTGCAG AAAAGCTTCT TAGAGACTCG AAAGCATTAT CAATTTGTGA ATCTGCAAAC
GAGGTTCAGC GCAGTAATAT AATAATGATG CTTCAAATGA TGGAGCAAAA ACCGCAGGGT
TAA
|
|---|
| Protein sequence | MEFSFSKELL QLKAMVSKFV DKDLAPFAAE YDKKENPKDC IPWSIIEKAM GLGLGSAAVP
KEFGGSGLSS LEILTIIEEL ARGDAGFAYT LLSTITGAQL ITKFGTDEQK NQWLTKIAND
QTKRFLMGFA LSEPQTGSDN MSPNPNAGML TTAELTDGQY IINGTKSFIT NAGIAGLYLV
WARTDKSKGA PQGGLSVFLV PADAPGLKVG KIEDKMGNRL SQQGELIFEN CIIPASNLLG
KEGMGLPVCL AMIENRFSTV GAIGTGIAQA AFNISYKYAK ERVQGGAPII NQQAISHKLA
NILIAIESSR LLYQKAAWHL DNMIPGMVIG SMSKVAGSEA AIMASNETIQ ILGCYGYSRE
YPAEKLLRDS KALSICESAN EVQRSNIIMM LQMMEQKPQG
|
|---|
| |