| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1558 |
|---|
| Symbol | |
|---|
| ID | 7310321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1907871 |
|---|
| End bp | 1908857 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643608487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002505890 |
|---|
| Protein GI | 220928981 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGG GTTATGAGGC TTTAGAGTTA TCGACTCAAA TGATTATTAA AGAGGCAATA
AATAGAGGTA TTAATATTGA AGTTTTAGAT TGGGACGACA ATTTTGTCAG GTTAACAAAA
GGAAGAAGGA TAGAATATTT AAAACAGGCA ACACGTACTT CGGTCGACAC ATATATTTCA
CCTTTAATTA TGGAGAATAA AGAGGTTACA AAACGAATAT TAGCAGAAAA TGGACTGAGT
GTTCCAAAAG GAATTACAAT CAAAAAAATT GACAAATTCA ATACAGAGGT CTCTCAATTT
AAAGGAAAAG ATATTGTTAT TAAACCTAAA TCCACAAACT TTGGTCAGGG CGTAGTTATT
CTAAAGCAGC CTTTCACAGA ATCCGATGTA CAAAACGCGA TAGAACAGGC ATTTGAATTT
GATCATTCTG TATTAATAGA AGAATTTATT TCTGGAAAGG AATATAGATT TTTAGTAATT
GGTGAAGAGG TTGCAGCTAT TCTTCACAGG GTCCCGGCTA ATGTTACAGG AGATGGTAAG
CATACAATTG CAGAGCTCGT TAACGAAAAG AATAAACATC CTCTAAGAGG AAAAGGTTAT
GTTACACCGC TGGAAAAAAT AACCTTAGGT CAAATTGAAA AAGATTTTTT GAAATTTCAA
GGAAAGACGT TTGATACTAT TCCAAATATT AACGAAACAG TATATTTGCG TGAAAACTCG
AATATTAGCA CCGGTGGAGA CAGTATAGAT TTTACTGATG AAATTATAGA TGCATATAAA
ACAATCGCTG TAGAGGCTGC CAAGGCTGTT GGTGCCAAAA TATGCGGTGC GGATATTATT
ATCCGTGATA TAAACGATAG TCCAAACAAT AATAATCACA GTATTATTGA ATTAAATTTT
AATCCGGCAC TTCATATACA TGATTATCCT TACAAAGGGA AAAACCGACA GGTTGAAAAA
AAGGTTCTTG ACCTTTTAGG ATTTTAA
|
|---|
| Protein sequence | MLKGYEALEL STQMIIKEAI NRGINIEVLD WDDNFVRLTK GRRIEYLKQA TRTSVDTYIS
PLIMENKEVT KRILAENGLS VPKGITIKKI DKFNTEVSQF KGKDIVIKPK STNFGQGVVI
LKQPFTESDV QNAIEQAFEF DHSVLIEEFI SGKEYRFLVI GEEVAAILHR VPANVTGDGK
HTIAELVNEK NKHPLRGKGY VTPLEKITLG QIEKDFLKFQ GKTFDTIPNI NETVYLRENS
NISTGGDSID FTDEIIDAYK TIAVEAAKAV GAKICGADII IRDINDSPNN NNHSIIELNF
NPALHIHDYP YKGKNRQVEK KVLDLLGF
|
|---|
| |