Gene Ccel_1471 details

Gene Information

• Locus tag: Ccel_1471
• ID: 7310240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 1785202
• End bp: 1787019
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643608397
• Product: GTP-binding protein TypA
• Protein accession: YP_002505805
• Protein GI: 220928896
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.885287
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATATCA GACAAGATAT AAGAAATATA GCAATAATAG CACACGTTGA CCATGGAAAG 
ACTACTATGG TCGATGCCAT GTTAAGACAG AGTGGTATAT TCAGAGAAAA CGAGGCTGTT 
GCAGAAAGAG TAATGGATTC CAATGACCTT GAAAAAGAAA GAGGAATTAC AATACTTGCA 
AAAAATACTG CTGTTAACTA TAACGGGATT AAAATAAATA TTGTTGATAC GCCCGGCCAT 
GCTGACTTTG GAGGAGAAGT TGAACGTGTA TTAAAAATGG TTGACGGTGT TTTGCTGTTA 
GTAGATTCAT TTGAAGGTGC AATGCCACAA ACCAGGTTTG TACTTAAAAA AGCACTTCAG 
CTCAATTTAA AGCCGATTGT TGTTGTTAAT AAGATTGACA GACCTGAAGC GAGACCTGAG 
GAAGTAGTTG ATGAAGTATT AGAGCTGTTT ATTGAACTGG GGGCTGATGA TGACCAGCTG 
GAGTTCCCTG TTATTTATGC TTCTTCTAGA GAAGGTTTCG CAGTTTGTGA CCTTGGAGGA 
GAAAGAAGAG ATTTAAAACC TTTGTTTGAT ATAATCATAG ACAAAGTTCC GTCACCTAGG 
GGTGAACTTG ATGGAACTTT GCAATTATTG GTTTCAAATA TTGACTATGA TGAATATGTT 
GGAAGAATAG CTATAGGCAG AATAGAAAGA GGGTCTATAA AGCTTGGTCA GCAGGCCATA 
ATATGCAAAA AAGAAGGAAA CCAGCTCAAT GCAAAAATAT CAAAGCTGTA TTCTTATGAT 
GGACTGAAGA GAATAGAGAC TGCAGAAGCG AAGCTTGGCG ATATAGTTGC TGTTTCCGGT 
GTGGGTGATG TTACAATCGG AGATACAATA TGTGAAGTGG GTTCACCTGA CCCATTACCA 
TTTATTGCCA TTGATGAACC TACTCTGTCA ATGACCTTTA GTGTTAACAA CAGCCCTTTT 
GCAGGAAAAG AAGGTACGTT TGTTACTTCA AGGCATTTGA GGGACAGGCT TTTTAAAGAG 
TTGGAAACAA ATGTAAGTTT GAAGGTTGAA GAAACTGATT CTCCTGACGC TTTTGTTGTA 
TCAGGAAGAG GAGAACTTCA CCTCTCGATA TTGGTTGAAA CAATGAGAAG ACAAGGGTAT 
GAATTCCAGG TTTCAAAGCC GACTGTTATT AACAAGGAAA TAGACGGTGT ATTAATGGAG 
CCTATAGAAT ACCTGATGAT AGATGTTCCT GAAGAATTCA TGGGAACAGT AATGGAGAAA 
CTCGGGCAGA GGAAATCTGA GATGGCTAAT ATGACATCCG CAAATCAGGG CTATATGAGA 
CTTGAATTCA GGATTCCGGC AAGAGGTTTG ATCGGATACA GGTCTGAATT GCTTACTGAT 
ACAAAGGGTA ATGGAATCAT GAACCACGTA TTCCATGGCT ATGAACCTTA TAAAGGTGAA 
ATCCCCACAA GGACAAGAGG TTCATTGGTT GCTTGGGAAG ACGGAGAAGC TGTTACTTAC 
GGCTTGTACA ATGCTCAAGA AAGAGGAACG CTTTTCATAA CACCGGGAAC AAAGGTTTAT 
GAAGGTATGG TTGTCGGAGA GAACGCCAGA AACGATGATC TTGTTGTAAA TGTTTGCAAG 
AAGAAGCATG TTACAAATAT GAGAGCATCC GGATCAGATG AAGCACTGAG GTTAACGCCA 
CCAACAATTC TGAGCCTTGA GCAGGCATTG GAATTTATTG CTGAGGACGA ACTTGTAGAG 
ATAACTCCAA AGAGTATCCG TTTAAGGAAA AAAGTTCTGG GTACCGAATC AAGAGCAAAG 
ATAAGAAGCA AAATGTAA 

 

Protein sequence

MDIRQDIRNI AIIAHVDHGK TTMVDAMLRQ SGIFRENEAV AERVMDSNDL EKERGITILA 
KNTAVNYNGI KINIVDTPGH ADFGGEVERV LKMVDGVLLL VDSFEGAMPQ TRFVLKKALQ 
LNLKPIVVVN KIDRPEARPE EVVDEVLELF IELGADDDQL EFPVIYASSR EGFAVCDLGG 
ERRDLKPLFD IIIDKVPSPR GELDGTLQLL VSNIDYDEYV GRIAIGRIER GSIKLGQQAI 
ICKKEGNQLN AKISKLYSYD GLKRIETAEA KLGDIVAVSG VGDVTIGDTI CEVGSPDPLP 
FIAIDEPTLS MTFSVNNSPF AGKEGTFVTS RHLRDRLFKE LETNVSLKVE ETDSPDAFVV 
SGRGELHLSI LVETMRRQGY EFQVSKPTVI NKEIDGVLME PIEYLMIDVP EEFMGTVMEK 
LGQRKSEMAN MTSANQGYMR LEFRIPARGL IGYRSELLTD TKGNGIMNHV FHGYEPYKGE 
IPTRTRGSLV AWEDGEAVTY GLYNAQERGT LFITPGTKVY EGMVVGENAR NDDLVVNVCK 
KKHVTNMRAS GSDEALRLTP PTILSLEQAL EFIAEDELVE ITPKSIRLRK KVLGTESRAK 
IRSKM