Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1459 |
Symbol | dnaE |
ID | 7310230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1772420 |
End bp | 1775899 |
Gene Length | 3480 bp |
Protein Length | 1159 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608385 |
Product | DNA polymerase III DnaE |
Protein accession | YP_002505793 |
Protein GI | 220928884 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00150549 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAATT TTGTACACTT GCATGTACAT ACAGAGTATA GTCTACTTGA CGGAGCAAAT AGAATAAAAG ATCTTATACA AAGGGTTAAA GAGTTGGGCA TGGACAGTGT AGCTATAACT GACCATGGAG TTATGTACGG GGTAGTGGAA TTCTACAAGG AGGCAGTAGA GAACGGAATC AAGCCCATAC TTGGCTGTGA GGTATATACT GCAAAAAGAA CCATGCAGGA CAAGCAGCCG GGAATAGACT CTGATTATGG GCATCTTGTA CTGCTGGCGA AAAATCAGAT AGGGTACAAA AACCTTATGA AAATAGTTTC ACTTGGATTT ACCGAGGGAT ATTATTATAA GCCCAGAGTG GATTATGAAA CACTGGAGAG ATATTCGGAA GGTATTATAG CCCTAAGTGC ATGTTTATCC GGGGATATTC CGTCTGCAAT ATTGAGCAAT GATTACGAAA AAGCAGTGGA GCTTGCTAAT AGATTAAACC GTATATTCGG ACAAGGGAAT TTTTACCTTG AGCTTCAGCA TAACGGTATA AACGAGCAAA ACTTGGTTAA TCAGCATCTA ATTAAAATGT CGGGGGAACT TGGTATACCT TTGGTTGCCA CTAATGATGC ACACTATCTG ACAAAGGAAA GTGCCAAGTC CCATGAGATA CTTTTATGTA TTCAGACAGG CAAAACAATT AATGATGATA ACAGGATGCG GTTTAATACT GATGAAGTTT ATGTAAAGTC ACCTGAAGAA ATGTACGATA ACTTCAAAAA CATTAAGCAG GCCTTGGAAA ATACGGTTAA AATTGCTGAA ATGTGTAATG TAGAGCTGGA ATTTGGAAAG CTGCACTTGC CCAGCTTTGA TGTTGAGGAA GGGTACACTC CTTATGAATA TTTGAGAGAG CAGTGCTATA AAGGACTCAA GTCAAGGTAT GGCGAGAGTT GTTCGGAAGA GATTGTGCAT AGACTAGAAT ATGAGCTTTC CGTAATTTCA CAGATGGGCT ATGTAGACTA TTTTCTCATT GTGTGGGATT TTATCAGGTA TGCAAGAGAT CAAGATATAA TGGTAGGGCC GGGAAGAGGT TCCGCAGCGG GGAGCATAGT CTCCTATGCC CTTGGAATAA CCAGTATTGA TCCTCTCAAG TATAACCTCT TGTTTGAAAG ATTTCTTAAT CCTGAGAGAA TCAGCATGCC TGACATAGAC ATTGACTTCT GTTATGAGCG AAGACAGGAG GTTATTGATT ATGTAATCAG AAAGTATGGC AAGGACAGGG TATCACAGAT AATTACCTTT GGAACGATGG CTGCAAGAGC AGTTATAAGA GATGTAGGAA GAGCACTGGA TATCCCTTAC GGGGACGTTG ATGCTATTGC AAAGATGATA CCGTTTCAGA TTGGAATGAA CATTGATAAG GCACTGGAAC TTAATCAGGA ATTAAAGAAA AGATATGATA CCGATGAGGA AACACAGGTG CTTATTGATA CCGCCAGAAC TCTTGAAGGC CTTCCAAGAC ATGCATCAAC ACATGCTGCC GGGGTAGTTA TATCAAAGGA ACCCATAGTG GAATATGTTC CTCTCCAACT AAACGACAAT AGTGTGACTA CGCAGGTAAC GGCCGTACCT CTGGAAGAGC TGGGGCTCCT CAAAATGGAC TTTTTGGGAT TAAGGACACT TACTGTTATA CGTGATGCAG TAGATCTTGT AGAACAAGGT CATGGCAGAA AAATAGACAT TCAGCAAATA GACTTTGATG ACAAGGATGT CTATAAAATG ATTGGAGAAG GCAGGACAGT GGGGGTTTTT CAGCTGGAAA GTGCTGGGAT GACTCAGTTT ATGAAGGAAC TACAGCCAAC ATCACTGGAA GATATCATAG CGGGTATATC CCTCTACAGA CCCGGTCCTA TGGATCAGAT ACCCAGATAC ATCAGAAATA AAAATAATCC TAAACATATA AGATATCATC ATCCAATGCT TGAAAAAATT CTTGATGTAA CGTACGGATG CATGGTGTAT CAGGAACAGG TAATGCAGAT AGTAAGAGAG CTGGGAGGCT ACTCAATGGG CAGGTCTGAC CTTGTAAGAC GTGCCATGTC CAAAAAGAAG ATATCCGTAA TGGAACAGGA ACGCAAGAAC TTCATATACG GAATAACGGA TGAGGAAGGT AATGAGATTG TTAAGGGTGC AGTAAAAAAC GGTGTGGACG AGATTACAGC CAATAAGATA TTTGATGAAA TGATGGATTT TGCAAGCTAT GCCTTTAACA AGTCCCATGC AGCAGCGTAT GCTGTTGTGG CATATCAGAC CGCATGGCTC AAGTTCTACT ATCCCATTGA GTTTATGGCA GCTTCCATAA ACAGTTTTTT GGGCAGCAGT GACAAGGTAT CCCAGTATGT AAATGAATGT AAAATTCTCA ACATAAAGGT ACTTCCGCCG GATATCAATG AAAGCAACGT AAAGTTTACA GTTATTAATA AAAATATACG TTTTGGTTTG GCAGCAATTA AAAATGTAGG TGAAAACGCG ATAAAATCTG TCATAGTAGA AAGACAACAG AACGGAGAAT TTAAATCCTT TTTGGATTTC TGTCAAAGAA TAGAGGGACG TGATATTAAT AAAAGGTGTA TCGAAAGCCT TATAAAGAGC GGAGCATTTG ACTCATTAAA AGTGTTCAGA TCAAAACTAA TGGCAGTATA TGAGAGACTT CTGGACGGAA TTTCGCAGAA CCGTAAAAAA AATATGGACG GACAGCTGTC CATATTTGAT ATGATGAGTG AGCCTCAGGA GCTGCTGCAG GAGGATTATC CTGACATAAA GGAATACCCG GCAAATGTAC TTCTGGCAAT GGAAAAGGAA ATGCTGGGAT TATACGTATC AGGACACCCA CTGAGTGAAT ATCAGGACAT ATTGGAGACA AATGTAAATC TTTACAGCAG TGAAATGTTT ATTGATACAG ATGAGAATTC AAATGATATT GAGCTAAACA GTAAGAAACT TCAGGATTCC ATGAAGGTAA CAGTTGGGGG CATAGTAGTG TCAAAAAAGA CCAAGGCAAC AAAAAACAAT AATCTAATGG CTTTTGTTGG TCTTGAAGAT TTGTACGGTA CTATGGAACT TATAGTTTTT CCGACAGTTT ATGAAAAATT CTCCCAGCTT TTACAGCAGG AAAGTATAAT CATTGTAAAT GGCAGGCTCA GCATGAGGGA GGATGAACAG CCCAAAATAA TTGCAGAGGA AGTTCTGCCT ATAAAAGGTC TACAGGAGAA GGGGCTGTAT TTAACTTTGC CTGAGCAGCT CCCCAGGGAG GACGGGGCTG CTTTGAGAGC GTTACTCAGA TATTTTTCAG GTTCGACTCC TACGTATATT GCAAAAAATA ATGGAAATAA ATTTAAAAAA CTTGACAGGC AATACTGGAT ATCTGTCAAT AATGTAATAA TGGAAGAATT AGATGGCAGG CTGGGCAAAA AAAATGTAGT ATTAAAATAA
|
Protein sequence | MGNFVHLHVH TEYSLLDGAN RIKDLIQRVK ELGMDSVAIT DHGVMYGVVE FYKEAVENGI KPILGCEVYT AKRTMQDKQP GIDSDYGHLV LLAKNQIGYK NLMKIVSLGF TEGYYYKPRV DYETLERYSE GIIALSACLS GDIPSAILSN DYEKAVELAN RLNRIFGQGN FYLELQHNGI NEQNLVNQHL IKMSGELGIP LVATNDAHYL TKESAKSHEI LLCIQTGKTI NDDNRMRFNT DEVYVKSPEE MYDNFKNIKQ ALENTVKIAE MCNVELEFGK LHLPSFDVEE GYTPYEYLRE QCYKGLKSRY GESCSEEIVH RLEYELSVIS QMGYVDYFLI VWDFIRYARD QDIMVGPGRG SAAGSIVSYA LGITSIDPLK YNLLFERFLN PERISMPDID IDFCYERRQE VIDYVIRKYG KDRVSQIITF GTMAARAVIR DVGRALDIPY GDVDAIAKMI PFQIGMNIDK ALELNQELKK RYDTDEETQV LIDTARTLEG LPRHASTHAA GVVISKEPIV EYVPLQLNDN SVTTQVTAVP LEELGLLKMD FLGLRTLTVI RDAVDLVEQG HGRKIDIQQI DFDDKDVYKM IGEGRTVGVF QLESAGMTQF MKELQPTSLE DIIAGISLYR PGPMDQIPRY IRNKNNPKHI RYHHPMLEKI LDVTYGCMVY QEQVMQIVRE LGGYSMGRSD LVRRAMSKKK ISVMEQERKN FIYGITDEEG NEIVKGAVKN GVDEITANKI FDEMMDFASY AFNKSHAAAY AVVAYQTAWL KFYYPIEFMA ASINSFLGSS DKVSQYVNEC KILNIKVLPP DINESNVKFT VINKNIRFGL AAIKNVGENA IKSVIVERQQ NGEFKSFLDF CQRIEGRDIN KRCIESLIKS GAFDSLKVFR SKLMAVYERL LDGISQNRKK NMDGQLSIFD MMSEPQELLQ EDYPDIKEYP ANVLLAMEKE MLGLYVSGHP LSEYQDILET NVNLYSSEMF IDTDENSNDI ELNSKKLQDS MKVTVGGIVV SKKTKATKNN NLMAFVGLED LYGTMELIVF PTVYEKFSQL LQQESIIIVN GRLSMREDEQ PKIIAEEVLP IKGLQEKGLY LTLPEQLPRE DGAALRALLR YFSGSTPTYI AKNNGNKFKK LDRQYWISVN NVIMEELDGR LGKKNVVLK
|
| |