Gene Ccel_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1459 
SymboldnaE 
ID7310230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1772420 
End bp1775899 
Gene Length3480 bp 
Protein Length1159 aa 
Translation table11 
GC content40% 
IMG OID643608385 
ProductDNA polymerase III DnaE 
Protein accessionYP_002505793 
Protein GI220928884 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00150549 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATT TTGTACACTT GCATGTACAT ACAGAGTATA GTCTACTTGA CGGAGCAAAT 
AGAATAAAAG ATCTTATACA AAGGGTTAAA GAGTTGGGCA TGGACAGTGT AGCTATAACT
GACCATGGAG TTATGTACGG GGTAGTGGAA TTCTACAAGG AGGCAGTAGA GAACGGAATC
AAGCCCATAC TTGGCTGTGA GGTATATACT GCAAAAAGAA CCATGCAGGA CAAGCAGCCG
GGAATAGACT CTGATTATGG GCATCTTGTA CTGCTGGCGA AAAATCAGAT AGGGTACAAA
AACCTTATGA AAATAGTTTC ACTTGGATTT ACCGAGGGAT ATTATTATAA GCCCAGAGTG
GATTATGAAA CACTGGAGAG ATATTCGGAA GGTATTATAG CCCTAAGTGC ATGTTTATCC
GGGGATATTC CGTCTGCAAT ATTGAGCAAT GATTACGAAA AAGCAGTGGA GCTTGCTAAT
AGATTAAACC GTATATTCGG ACAAGGGAAT TTTTACCTTG AGCTTCAGCA TAACGGTATA
AACGAGCAAA ACTTGGTTAA TCAGCATCTA ATTAAAATGT CGGGGGAACT TGGTATACCT
TTGGTTGCCA CTAATGATGC ACACTATCTG ACAAAGGAAA GTGCCAAGTC CCATGAGATA
CTTTTATGTA TTCAGACAGG CAAAACAATT AATGATGATA ACAGGATGCG GTTTAATACT
GATGAAGTTT ATGTAAAGTC ACCTGAAGAA ATGTACGATA ACTTCAAAAA CATTAAGCAG
GCCTTGGAAA ATACGGTTAA AATTGCTGAA ATGTGTAATG TAGAGCTGGA ATTTGGAAAG
CTGCACTTGC CCAGCTTTGA TGTTGAGGAA GGGTACACTC CTTATGAATA TTTGAGAGAG
CAGTGCTATA AAGGACTCAA GTCAAGGTAT GGCGAGAGTT GTTCGGAAGA GATTGTGCAT
AGACTAGAAT ATGAGCTTTC CGTAATTTCA CAGATGGGCT ATGTAGACTA TTTTCTCATT
GTGTGGGATT TTATCAGGTA TGCAAGAGAT CAAGATATAA TGGTAGGGCC GGGAAGAGGT
TCCGCAGCGG GGAGCATAGT CTCCTATGCC CTTGGAATAA CCAGTATTGA TCCTCTCAAG
TATAACCTCT TGTTTGAAAG ATTTCTTAAT CCTGAGAGAA TCAGCATGCC TGACATAGAC
ATTGACTTCT GTTATGAGCG AAGACAGGAG GTTATTGATT ATGTAATCAG AAAGTATGGC
AAGGACAGGG TATCACAGAT AATTACCTTT GGAACGATGG CTGCAAGAGC AGTTATAAGA
GATGTAGGAA GAGCACTGGA TATCCCTTAC GGGGACGTTG ATGCTATTGC AAAGATGATA
CCGTTTCAGA TTGGAATGAA CATTGATAAG GCACTGGAAC TTAATCAGGA ATTAAAGAAA
AGATATGATA CCGATGAGGA AACACAGGTG CTTATTGATA CCGCCAGAAC TCTTGAAGGC
CTTCCAAGAC ATGCATCAAC ACATGCTGCC GGGGTAGTTA TATCAAAGGA ACCCATAGTG
GAATATGTTC CTCTCCAACT AAACGACAAT AGTGTGACTA CGCAGGTAAC GGCCGTACCT
CTGGAAGAGC TGGGGCTCCT CAAAATGGAC TTTTTGGGAT TAAGGACACT TACTGTTATA
CGTGATGCAG TAGATCTTGT AGAACAAGGT CATGGCAGAA AAATAGACAT TCAGCAAATA
GACTTTGATG ACAAGGATGT CTATAAAATG ATTGGAGAAG GCAGGACAGT GGGGGTTTTT
CAGCTGGAAA GTGCTGGGAT GACTCAGTTT ATGAAGGAAC TACAGCCAAC ATCACTGGAA
GATATCATAG CGGGTATATC CCTCTACAGA CCCGGTCCTA TGGATCAGAT ACCCAGATAC
ATCAGAAATA AAAATAATCC TAAACATATA AGATATCATC ATCCAATGCT TGAAAAAATT
CTTGATGTAA CGTACGGATG CATGGTGTAT CAGGAACAGG TAATGCAGAT AGTAAGAGAG
CTGGGAGGCT ACTCAATGGG CAGGTCTGAC CTTGTAAGAC GTGCCATGTC CAAAAAGAAG
ATATCCGTAA TGGAACAGGA ACGCAAGAAC TTCATATACG GAATAACGGA TGAGGAAGGT
AATGAGATTG TTAAGGGTGC AGTAAAAAAC GGTGTGGACG AGATTACAGC CAATAAGATA
TTTGATGAAA TGATGGATTT TGCAAGCTAT GCCTTTAACA AGTCCCATGC AGCAGCGTAT
GCTGTTGTGG CATATCAGAC CGCATGGCTC AAGTTCTACT ATCCCATTGA GTTTATGGCA
GCTTCCATAA ACAGTTTTTT GGGCAGCAGT GACAAGGTAT CCCAGTATGT AAATGAATGT
AAAATTCTCA ACATAAAGGT ACTTCCGCCG GATATCAATG AAAGCAACGT AAAGTTTACA
GTTATTAATA AAAATATACG TTTTGGTTTG GCAGCAATTA AAAATGTAGG TGAAAACGCG
ATAAAATCTG TCATAGTAGA AAGACAACAG AACGGAGAAT TTAAATCCTT TTTGGATTTC
TGTCAAAGAA TAGAGGGACG TGATATTAAT AAAAGGTGTA TCGAAAGCCT TATAAAGAGC
GGAGCATTTG ACTCATTAAA AGTGTTCAGA TCAAAACTAA TGGCAGTATA TGAGAGACTT
CTGGACGGAA TTTCGCAGAA CCGTAAAAAA AATATGGACG GACAGCTGTC CATATTTGAT
ATGATGAGTG AGCCTCAGGA GCTGCTGCAG GAGGATTATC CTGACATAAA GGAATACCCG
GCAAATGTAC TTCTGGCAAT GGAAAAGGAA ATGCTGGGAT TATACGTATC AGGACACCCA
CTGAGTGAAT ATCAGGACAT ATTGGAGACA AATGTAAATC TTTACAGCAG TGAAATGTTT
ATTGATACAG ATGAGAATTC AAATGATATT GAGCTAAACA GTAAGAAACT TCAGGATTCC
ATGAAGGTAA CAGTTGGGGG CATAGTAGTG TCAAAAAAGA CCAAGGCAAC AAAAAACAAT
AATCTAATGG CTTTTGTTGG TCTTGAAGAT TTGTACGGTA CTATGGAACT TATAGTTTTT
CCGACAGTTT ATGAAAAATT CTCCCAGCTT TTACAGCAGG AAAGTATAAT CATTGTAAAT
GGCAGGCTCA GCATGAGGGA GGATGAACAG CCCAAAATAA TTGCAGAGGA AGTTCTGCCT
ATAAAAGGTC TACAGGAGAA GGGGCTGTAT TTAACTTTGC CTGAGCAGCT CCCCAGGGAG
GACGGGGCTG CTTTGAGAGC GTTACTCAGA TATTTTTCAG GTTCGACTCC TACGTATATT
GCAAAAAATA ATGGAAATAA ATTTAAAAAA CTTGACAGGC AATACTGGAT ATCTGTCAAT
AATGTAATAA TGGAAGAATT AGATGGCAGG CTGGGCAAAA AAAATGTAGT ATTAAAATAA
 
Protein sequence
MGNFVHLHVH TEYSLLDGAN RIKDLIQRVK ELGMDSVAIT DHGVMYGVVE FYKEAVENGI 
KPILGCEVYT AKRTMQDKQP GIDSDYGHLV LLAKNQIGYK NLMKIVSLGF TEGYYYKPRV
DYETLERYSE GIIALSACLS GDIPSAILSN DYEKAVELAN RLNRIFGQGN FYLELQHNGI
NEQNLVNQHL IKMSGELGIP LVATNDAHYL TKESAKSHEI LLCIQTGKTI NDDNRMRFNT
DEVYVKSPEE MYDNFKNIKQ ALENTVKIAE MCNVELEFGK LHLPSFDVEE GYTPYEYLRE
QCYKGLKSRY GESCSEEIVH RLEYELSVIS QMGYVDYFLI VWDFIRYARD QDIMVGPGRG
SAAGSIVSYA LGITSIDPLK YNLLFERFLN PERISMPDID IDFCYERRQE VIDYVIRKYG
KDRVSQIITF GTMAARAVIR DVGRALDIPY GDVDAIAKMI PFQIGMNIDK ALELNQELKK
RYDTDEETQV LIDTARTLEG LPRHASTHAA GVVISKEPIV EYVPLQLNDN SVTTQVTAVP
LEELGLLKMD FLGLRTLTVI RDAVDLVEQG HGRKIDIQQI DFDDKDVYKM IGEGRTVGVF
QLESAGMTQF MKELQPTSLE DIIAGISLYR PGPMDQIPRY IRNKNNPKHI RYHHPMLEKI
LDVTYGCMVY QEQVMQIVRE LGGYSMGRSD LVRRAMSKKK ISVMEQERKN FIYGITDEEG
NEIVKGAVKN GVDEITANKI FDEMMDFASY AFNKSHAAAY AVVAYQTAWL KFYYPIEFMA
ASINSFLGSS DKVSQYVNEC KILNIKVLPP DINESNVKFT VINKNIRFGL AAIKNVGENA
IKSVIVERQQ NGEFKSFLDF CQRIEGRDIN KRCIESLIKS GAFDSLKVFR SKLMAVYERL
LDGISQNRKK NMDGQLSIFD MMSEPQELLQ EDYPDIKEYP ANVLLAMEKE MLGLYVSGHP
LSEYQDILET NVNLYSSEMF IDTDENSNDI ELNSKKLQDS MKVTVGGIVV SKKTKATKNN
NLMAFVGLED LYGTMELIVF PTVYEKFSQL LQQESIIIVN GRLSMREDEQ PKIIAEEVLP
IKGLQEKGLY LTLPEQLPRE DGAALRALLR YFSGSTPTYI AKNNGNKFKK LDRQYWISVN
NVIMEELDGR LGKKNVVLK