| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1437 |
|---|
| Symbol | |
|---|
| ID | 7310210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1745889 |
|---|
| End bp | 1746698 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608363 |
|---|
| Product | RNA methyltransferase, TrmH family, group 3 |
|---|
| Protein accession | YP_002505771 |
|---|
| Protein GI | 220928862 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATA TTCAAAGCAG TCAGAATTCA ACTATAAAGG ATATAAAGTC ACTACACTTA
AAGAAAAACA GGGATGCACA TGGCTTGTAT TTTGTGGAGG GAATACGCTT TGTCAGCGAT
GCCATAGACA ATGGACAGAG TATAGCAAAA ATTATTATTT CTGAAAAGCT GGAAGGCCTA
AATGGTGGCA GTGAACTGAT TGAAAAGGTT AAAGGTGCTT GCAGCGACAT AAGCCTTGTC
CCGGAAAAAA TATTCAGAGA AGTCTCCGAT ACTCAAACTC CTCAGGGTAT TCTTGCGGTT
ATTAAAAAGA ATAAATACAG TTTTGATAAG GTAATTACAG AAGGTAGTTC TGTTGTGATA
TTGGATTGCC TTCAAGACCC CGGCAATGCA GGCACCATCA TAAGGACAGC AGATGCTGCG
GGAATTTCGG CTGTTCTTAT GTCAAAGGGC TGCGTTGACC TTTATTCTCC AAAAGTTCTC
AGATCTACAA TGGGTTCTGT TTTCCATATT CCCATATTTG AAGGATTGAA TATTACAGAA
ATCATTCGTG TACTTAAACA AAACGACTAC AAGGTAATAG CTTCTCATTT ATCAGGAAAG
AACAACTACT TTCAGGAGGA TCTGACAGGC AGGAGTGCCA TAATTGTGGG CAACGAGGCA
AACGGAATAT CTGATGAGAC AGCCTATATG GCGGACAGCC TCGTAAAAAT ACCCATGCCC
GGCAAAGCAG AATCCTTAAA TGCTTCTGTT GCAGCTTCAG TTATGATATA TGAAATAGTA
AGACAGAAAA GTCATATACA ATTTCTATAA
|
|---|
| Protein sequence | MNYIQSSQNS TIKDIKSLHL KKNRDAHGLY FVEGIRFVSD AIDNGQSIAK IIISEKLEGL
NGGSELIEKV KGACSDISLV PEKIFREVSD TQTPQGILAV IKKNKYSFDK VITEGSSVVI
LDCLQDPGNA GTIIRTADAA GISAVLMSKG CVDLYSPKVL RSTMGSVFHI PIFEGLNITE
IIRVLKQNDY KVIASHLSGK NNYFQEDLTG RSAIIVGNEA NGISDETAYM ADSLVKIPMP
GKAESLNASV AASVMIYEIV RQKSHIQFL
|
|---|
| |