Gene Ccel_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1404 
Symbol 
ID7312226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand+ 
Start bp1707355 
End bp1707852 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content39% 
IMG OID643608326 
Productprotein of unknown function DUF988 
Protein accessionYP_002505738 
Protein GI220928829 
COG category[S] Function unknown 
COG ID[COG4708] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000940341 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATATCAGAAG AGTAACTGTG GCAGCCATGA TAGCAGCCGT GTATTTTGTC 
CTTACAATGA TTTTTTATCT AACAAGTTTT CAGCCGCTTC AAAGCAGGCT TTCAGAAGCT 
CTTACCGTAC TTCCGTATTT TACTCCTGTG GCCATACCGG GAATTTTTGT GGGTTGTATT 
ATCTCAAATA TTCTTGGAGG GAACGGAATA TGGGATGTGG TTATTGGAAG TCTTGCATCT 
CTTTTAGCAG CTTATCTTAC TTATAAAATA AGCTATAACA AGCCTAAACG TAAGCTACTG 
GCACCACTGC CCGCGGTATT GGTAAATGCT GTGTTTATTG GTACTATGCT TAGTGTGCTT 
TCTGATTTGC CCCTTTTTGC TACTATGTTA TCGGTGGGAT TGGGACAGGT GTTGGCATGT 
TATGTCCTTG GATTTCCATT AATGCTGCTT ATTGAGAGAA CGAAAAAATT AAACGAACTT 
TTTAAAGGTA TTTCTTAA
 
Protein sequence
MNKNIRRVTV AAMIAAVYFV LTMIFYLTSF QPLQSRLSEA LTVLPYFTPV AIPGIFVGCI 
ISNILGGNGI WDVVIGSLAS LLAAYLTYKI SYNKPKRKLL APLPAVLVNA VFIGTMLSVL 
SDLPLFATML SVGLGQVLAC YVLGFPLMLL IERTKKLNEL FKGIS