Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1402 |
Symbol | |
ID | 7310178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1705021 |
End bp | 1705542 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608324 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_002505736 |
Protein GI | 220928827 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00104471 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA ATCCTATTGT TACTTTTGAA ATGGAAAACG GGAATATTAT GAAGGCAGAA CTATATCCTG AAATTGCTCC CAATACTGTA AACAACTTCA TTTCTCTTAT AAATAAGGGC TTTTATAATG GCGTTATATT TCACAGGGTA ATACCTGGTT TTATGATACA GGGGGGAGAC CCGGAAGGAA CCGGAGTCGG CGGCCCTGAT TACAGCATTA AGGGAGAGTT CTCATCAAAC GGATTTAAAA ATGACTTAAA GCATGATAAG GGAGTTCTTT CCATGGCAAG AACAATGGTT CCTGATTCTG CCGGATCACA GTTTTTTATA ATGGTTGAAA GAGCACCTCA CCTTGACGGT CAATATGCTG CATTTGGTAA GGTAACCGAG GGAATTGAAG AAGCGGATAG AATAGTAAGC GTTAAGACGG ACTACAACGA CAAGCCAAAG GAACCTCAGG TAATGAAGAC GGTTACTGTT GAAACATTCG GTGTAGAATA TCCTGAACCT GAAAAAGTAT AA
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Protein sequence | MNKNPIVTFE MENGNIMKAE LYPEIAPNTV NNFISLINKG FYNGVIFHRV IPGFMIQGGD PEGTGVGGPD YSIKGEFSSN GFKNDLKHDK GVLSMARTMV PDSAGSQFFI MVERAPHLDG QYAAFGKVTE GIEEADRIVS VKTDYNDKPK EPQVMKTVTV ETFGVEYPEP EKV
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