Gene Ccel_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1402 
Symbol 
ID7310178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1705021 
End bp1705542 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content40% 
IMG OID643608324 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002505736 
Protein GI220928827 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00104471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA ATCCTATTGT TACTTTTGAA ATGGAAAACG GGAATATTAT GAAGGCAGAA 
CTATATCCTG AAATTGCTCC CAATACTGTA AACAACTTCA TTTCTCTTAT AAATAAGGGC
TTTTATAATG GCGTTATATT TCACAGGGTA ATACCTGGTT TTATGATACA GGGGGGAGAC
CCGGAAGGAA CCGGAGTCGG CGGCCCTGAT TACAGCATTA AGGGAGAGTT CTCATCAAAC
GGATTTAAAA ATGACTTAAA GCATGATAAG GGAGTTCTTT CCATGGCAAG AACAATGGTT
CCTGATTCTG CCGGATCACA GTTTTTTATA ATGGTTGAAA GAGCACCTCA CCTTGACGGT
CAATATGCTG CATTTGGTAA GGTAACCGAG GGAATTGAAG AAGCGGATAG AATAGTAAGC
GTTAAGACGG ACTACAACGA CAAGCCAAAG GAACCTCAGG TAATGAAGAC GGTTACTGTT
GAAACATTCG GTGTAGAATA TCCTGAACCT GAAAAAGTAT AA
 
Protein sequence
MNKNPIVTFE MENGNIMKAE LYPEIAPNTV NNFISLINKG FYNGVIFHRV IPGFMIQGGD 
PEGTGVGGPD YSIKGEFSSN GFKNDLKHDK GVLSMARTMV PDSAGSQFFI MVERAPHLDG
QYAAFGKVTE GIEEADRIVS VKTDYNDKPK EPQVMKTVTV ETFGVEYPEP EKV