Gene Ccel_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1376 
Symbol 
ID7310155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1674323 
End bp1676107 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content37% 
IMG OID643608298 
ProductS-layer domain protein 
Protein accessionYP_002505710 
Protein GI220928801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.47431e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAA AAATAGCAGG TAAGCTACTT AAAACAGTAT TCGCAGTTTT TATTGCAGGA 
AGCATGGTTT TAGGCTCAGC AACTGTTCAG GCGGCTGGGG TAAGTGATTT GAGCAAAAGT
TCAGTGTATG CCAGTGAAGC TATTCAATGG ATGGCAAACA ATAGTATCAT AAGCGGAGAT
AACCAGGGAA ACTTCAATCC AAGGCAGAGT ATAACAAGGG CTGAACTTAT AACACTATTG
GTAAAGGCAT TGGATATTGA TACTGAAAAC CTGCCTTCAA CAGCTACTTT TTCGGATGTA
CCTGTAAGCC ATTGGGCCTT CAAATATGTT GAAGCTGCCA ACAGGGCGGG TATAACCAGC
GGTACAGGAA GCGGTAAGTT CGGCATTAAC AGCCTGACTA CACGAGAACA GGTTACAACA
ATGCTTTTAA ACTATCTTTG TGTATCAAAG GAAGCTATTG TTGCAGAGCA GGGTTTGGAT
GACCTTTTAA AATTCAAAGA TGCCGGAAAA ATGTCTGATT GGGCAAAGGC ATCAATCAAG
TTTGCTGTCT CCAATAATAT TATGAGCGGA GTAAGTGCTG ATTCATTTTC TCCGTCGGGA
AAAGCGACAA AAGAACAGAT AGCTGTTATA TTATACAAGT TTGTAAATTC CAAGGAGAGT
ATTGAGCAAA ATGCGGCAGC ACTAAAAAAA GTTATTGTTA CGTACAATGA TGACTTAATT
AAACTTCAAA CACCTTGCAA GGTTATTGAA AATGACATAA TGATTCCGGC TGAGGTTTTT
TCAAAAACAG GGGCAAAGGT TGATTTTGAT AGTCAGGCAG GCATAATAGC CATTAAAAGC
TCGACTGCTC AGGATAAAAA TATCTATATG AGCATAGATA ATAAATCAGC TTATGTAAAC
TACACTGGTA GCGGCAACCC AATTTCAGAC CCACCTGCTC AGGATAAACT GGTTACCCTA
AATAATGCAC CTGAACAAAT AAGTGGTGTA GTTCTTGTCC CTGCAAAGGC AGTAGTCGAT
GCTCTTGGAA TTACAATGGA CTGGAACGAT AAAATCAATG TGTTGAAAAT TAAGGATAGT
ACTATTCCTA AGAATCCACA GCTGTACAAT GCTATGAAGA GTATGTTGGA TTACAAGGGT
GAATATAGTT CCGACTTAAT AATAAATATG AAAGAAGATA CCTTGGATAT GAATTTTGGA
ATGCATATGT CCATAAATGG AGCAATAAAC GGGAATAATT CAACATCAAA CGCCAAATTT
ACACTGACAC TTGACGGGGA ACAGGAAGAT TTAATGGATT ATCAAACCAT AAATATCGGA
GACAATATAT ATGTAAAAAA TCCAGAGACA GATTTATGGG ATACATACAA TAGAAGTGAG
GCGGAAGAAG AAGGTATTCT GTATACTGAT TTTGAGTCTG ATAGAAATGA AATGCTGAGA
TTATTGGATG TTTATGGGAA AATGAACATA TCTAATGAGG GAAAAACTAT ACTCAATGGA
GAGGAAGTCT CAAAGTATCA GGTGAGGCTG AACATTGAAT TACTGCAGGG ATTACTATCA
GCAGATATGC TGGAATATGG CTTAGGACTT AAAGATATCT ACAATAATGG CCTTGACACA
AGAATGTTTA TATATGTCAA TTCAAAAGGG CAGCTGGTAA AGCAGTCGGT TATAATAGCA
GGTGCAACGG AATTTGATGG TTCAACAACG GATATTGATA TGACAGTTAG TAGCATGTAT
ACTAATATCG GAAAAGAAAT AGAGATTGTA AGTCCTATAA AATAA
 
Protein sequence
MHKKIAGKLL KTVFAVFIAG SMVLGSATVQ AAGVSDLSKS SVYASEAIQW MANNSIISGD 
NQGNFNPRQS ITRAELITLL VKALDIDTEN LPSTATFSDV PVSHWAFKYV EAANRAGITS
GTGSGKFGIN SLTTREQVTT MLLNYLCVSK EAIVAEQGLD DLLKFKDAGK MSDWAKASIK
FAVSNNIMSG VSADSFSPSG KATKEQIAVI LYKFVNSKES IEQNAAALKK VIVTYNDDLI
KLQTPCKVIE NDIMIPAEVF SKTGAKVDFD SQAGIIAIKS STAQDKNIYM SIDNKSAYVN
YTGSGNPISD PPAQDKLVTL NNAPEQISGV VLVPAKAVVD ALGITMDWND KINVLKIKDS
TIPKNPQLYN AMKSMLDYKG EYSSDLIINM KEDTLDMNFG MHMSINGAIN GNNSTSNAKF
TLTLDGEQED LMDYQTINIG DNIYVKNPET DLWDTYNRSE AEEEGILYTD FESDRNEMLR
LLDVYGKMNI SNEGKTILNG EEVSKYQVRL NIELLQGLLS ADMLEYGLGL KDIYNNGLDT
RMFIYVNSKG QLVKQSVIIA GATEFDGSTT DIDMTVSSMY TNIGKEIEIV SPIK