Gene Ccel_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1373 
Symbol 
ID7310152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1670929 
End bp1672866 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content42% 
IMG OID643608295 
Productthreonyl-tRNA synthetase 
Protein accessionYP_002505707 
Protein GI220928798 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.40223e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA TTACATTAAA GGATGGAAGC AATAAGGAAT ACCAGAGCGG TATTACTATC 
AAGGAAGTTG CTGAAAGCAT CAGTGCAGGA CTTGCAAGGG CAGCTCTCGC GGGAGAGGTT
GACGGAAAGG TGAAGGAACT TGATTTCAAG CTTAATAATG ACTGTTCGTT GAGTCTTTTG
ACATTTGCAG ACGAAGGAGG AAGACTAGCC TACAGGCATA CTGCATCACA TGTTCTTGCA
CAGGCTGTTA AGAGGATGTT TCCAAATGTC AAGCTTGCAA TAGGCCCGGC TATAGAAAAC
GGTTTCTATT ATGATTTTGA TACTGATAAG AACTTTGCAC CCGAGGATTT GGCAAAGATT
GAAAAGGAAA TGGAGAAAAT CATAAAAGAA GATATTTCTC TTGAAAGATT TACATTGCCC
AGAGACGAGG CAATCAAATT TATGGAAGAG AAGGGTGAAC CCTACAAGAT AGAGCTTATA
AAGGAGCTAC CGGAAGGAGA AGAAATATCC TTCTACAAGC AGGGGGACTT TGTAGACCTC
TGTGCGGGCC CACATCTTCT GTCAACAGGA AAACTCAAGG CTGTAAAACT TATGAGTGCT
GCCGGGGCAT ACTGGAGAGG AAATGAGAAA AACAAGATGC TCCAGAGAAT TTATGGTACA
GCCTTCCCTA AGAAAAGTGA ACTGGAAGAA TATGTAACAA AACTTGAAGA AGCAAAGAAG
AGAGACCATA ATAAACTCGG AAGAGAACTT GAACTGTTCA CAACCGTTGA AGAAATAGGA
CAGGGACTTC CTTTGCTTAT GCCAAAGGGA GCTAGAATTG TTCAGACCTT GCAAAGATTT
GTTGAGGATG AAGAAGAGAG AAGGGGCTAC GTGCTGACAA AGACTCCTTT GATGGCAAAA
AGCGACTTGT ATAAGCTATC AGGACACTGG CAGCACTACA AGGACGGAAT GTTCCTTTTG
GGAGATGAGG AAAAGGACGA GGAAGTGATG GCGTTAAGGC CGATGACTTG CCCTTTCCAG
TTTATGATAT ACAACACAAA GCTTCACAGC TATCGTGACC TGCCAATAAG ATACGGCGAA
ACCTCCACTT TGTTCAGAAA CGAGGCTTCA GGAGAAATGC ACGGACTTAT ACGTGTCCGT
CAGTTTACAA TTTCAGAGGG ACATTTGGTT TGTACTCCAG AACAGCTTGA AGACGAATTC
AAGGGAGTTG TTGACCTGAT TAAATTTATG ATGGAAACTC TGGGAATTCA GGATGACGTA
ACCTACAGAT TCTCCAAGTG GGATCCCAAG AACAAGGAAA AATATATTGG AAACGAAGAA
GACTGGGAAA ACGTTCAGGA CCAGATGAGA ACTATTTTGG ACCACTTAAA GATAGACTAT
AAGGAAGCGG AAGGTGAAGC AGCCTTCTAC GGACCAAAGC TCGATATACA GTGCAAGAAC
GTGCACGGAA AGGAAGACAC TATTATTACC GTACAGGTTG ATTTTGCTCT TGCTGAGAGA
CTTAACATGG TTTACGTAGA TAAAAACAAT GAAAAGAAGC ATCCTTATAT AATTCACAGA
ACATCAATAG GTTGTTATGA AAGAACTCTT GCAATACTTA TTGAGAAATA TGCCGGAGCG
TTCCCAACCT GGTTATGTCC TGTTCAGGCA AAGATTCTTC CTTTGGTTGA CAAGCACCAT
GATTTTGCAC AAAAGGTAGC ACAAATGCTC AGGGACAAGG GTGTAAAAGT TGAAGTAGAT
ACAAGAAATG AAAAAATAGG ATACAAGATT AGAGAAGCTC AGATGGAAAA AATACCGTAC
ATGCTTGTAA TAGGAGACAA GGAAATGGAA AACAATGCTG TTTCGGTACG TTCCAGAAAA
GATGGAGATC TTGGGGCTAT GCCTGCGGAA CAGTTTGTTG ACAGAATAGT AGAAGAAATC
AGAACTCGTG CAAAATAA
 
Protein sequence
MIKITLKDGS NKEYQSGITI KEVAESISAG LARAALAGEV DGKVKELDFK LNNDCSLSLL 
TFADEGGRLA YRHTASHVLA QAVKRMFPNV KLAIGPAIEN GFYYDFDTDK NFAPEDLAKI
EKEMEKIIKE DISLERFTLP RDEAIKFMEE KGEPYKIELI KELPEGEEIS FYKQGDFVDL
CAGPHLLSTG KLKAVKLMSA AGAYWRGNEK NKMLQRIYGT AFPKKSELEE YVTKLEEAKK
RDHNKLGREL ELFTTVEEIG QGLPLLMPKG ARIVQTLQRF VEDEEERRGY VLTKTPLMAK
SDLYKLSGHW QHYKDGMFLL GDEEKDEEVM ALRPMTCPFQ FMIYNTKLHS YRDLPIRYGE
TSTLFRNEAS GEMHGLIRVR QFTISEGHLV CTPEQLEDEF KGVVDLIKFM METLGIQDDV
TYRFSKWDPK NKEKYIGNEE DWENVQDQMR TILDHLKIDY KEAEGEAAFY GPKLDIQCKN
VHGKEDTIIT VQVDFALAER LNMVYVDKNN EKKHPYIIHR TSIGCYERTL AILIEKYAGA
FPTWLCPVQA KILPLVDKHH DFAQKVAQML RDKGVKVEVD TRNEKIGYKI REAQMEKIPY
MLVIGDKEME NNAVSVRSRK DGDLGAMPAE QFVDRIVEEI RTRAK