| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1358 |
|---|
| Symbol | |
|---|
| ID | 7310140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 1655243 |
|---|
| End bp | 1656004 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608280 |
|---|
| Product | purine or other phosphorylase family 1 |
|---|
| Protein accession | YP_002505692 |
|---|
| Protein GI | 220928783 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.806507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATAG GAATAATTGG AGCTATGGAG CAGGAAATAA AGCTATTGGC AGAGAGTATG
CTAATAAACG AAACAAAAAT TATTGCCATG CGTGAATATT ATATCGGTAA ACTCTTTGGT
AAAGACGTTG TCCTGGTATT TTCAAAGTGC GGCAAGGTTG CTGCAGGATC AACCGTTACT
ACGCTTATAG AAACATTTAA TGTAGATGTT GTTATTTTTA CAGGTGTTGC CGGAGGGGCT
GACAAAAACC TGAAAATAGG TGATATTATA GTTGCAGACA AGCTGGTGCA GCACGACATG
GATGCTAGCT CCCTGCCGGG ATTCAGCAAG TTTGAAATTC CTCTTTTAGG AGTCGGAACT
TTTATTGCTC CTCCCCACAT GGTATCTCTG GGTAAAAAAT CTGCTGAGTT TTATGTATCT
ACTTGTTTGA ATTCTGATGT TGAGGAAAGT ATATTAAAAG AATTTGATAT AGTTACTCCC
AATATTATAA CAGGTACTGT TGCAAGTGGT GACCAATTTA TTGCAGATAG TAATAAGGTT
TTAAGCCTTT CTCAGGAAAT CGAGAATCTT AAGTGTATAG AAATGGAAGG CGCGGCAGTA
GCACAGGTAT GTTACGAGCA TGGTATTGAC TATATTATAT TCCGTGTTAT TTCTGACAAA
GCAGACGAGC ATGCCAATAT CAATTTTCCG AGATTTATTG AAAAAGCAGC ATCCCACTTT
ACCCGAGGAA TTGTCGAACA CTTTGTTTCA GAAATAGGAT GA
|
|---|
| Protein sequence | MLIGIIGAME QEIKLLAESM LINETKIIAM REYYIGKLFG KDVVLVFSKC GKVAAGSTVT
TLIETFNVDV VIFTGVAGGA DKNLKIGDII VADKLVQHDM DASSLPGFSK FEIPLLGVGT
FIAPPHMVSL GKKSAEFYVS TCLNSDVEES ILKEFDIVTP NIITGTVASG DQFIADSNKV
LSLSQEIENL KCIEMEGAAV AQVCYEHGID YIIFRVISDK ADEHANINFP RFIEKAASHF
TRGIVEHFVS EIG
|
|---|
| |