Gene Ccel_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1313 
SymbolrplT 
ID7310098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1616494 
End bp1616847 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content39% 
IMG OID643608232 
Product50S ribosomal protein L20 
Protein accessionYP_002505647 
Protein GI220928738 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000242462 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG TTAAAGGTGC GGTTAGAACC CGTGCAAGAC ATAAAAAGAT ACTAAAGCTT 
GCAAAAGGAT ATTTTGGTGC AAAGAGCAAG TTGTTTAGAA TGGCAAACCA AGCTGTAATG
AAATCCTTGA ACTATGCTTA CAACGATAGA AGAGCAAAGA AGAGAGATTT CAGAAAGCTT
TGGATCGCAA GAATTAACGC TGCTGCAAGA ATAAACGGTT TAACATATAG CAGATTTATC
AGCGGTTTAA GGAAATCAGG AATAGAACTT AATAGAAAAG TTCTTGCTGA TTTGGCAGTT
AACGATGCAG CTGCATTTGC ACAGCTGGCA GAGACTGCTA AAGCTGCCAA ATAA
 
Protein sequence
MARVKGAVRT RARHKKILKL AKGYFGAKSK LFRMANQAVM KSLNYAYNDR RAKKRDFRKL 
WIARINAAAR INGLTYSRFI SGLRKSGIEL NRKVLADLAV NDAAAFAQLA ETAKAAK