Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1302 |
Symbol | |
ID | 7312211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1606915 |
End bp | 1607457 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643608221 |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_002505636 |
Protein GI | 220928727 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.020943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAA TGTCAAAAAG TAGACAATTT ACTATGGATA TTTTATTGGA TGCATTCTGG AAATTATATA GAAATTATGA TATAGAAAAG ATAACTATAA AAAAAATAAC TGATACCGCC GGATATAACA GAATTACATT TTATGACTAC TTTAAAGATA TATATGATGC TCTCGATTGT CTTGAAAATA AAATATTGTC TGAGATTGAA CTGAAGATCC ATAAATTATT TATGGCTACA GGAAGTGCAA CTACTGATAC TTTCACCGAA CAAGTAGTAT TTCTTTTCAA TGAGTACCGG GATTTTCTCA TGAGATTCTT CAGTGATAGC AGAAATAAGA GTTTTGAAGG AAAACTACAA AATTTTATAA AAAGCCTGCT TACAAAGTAT TCTAAGGTTT CTCTAGATTT CAATAACAAA TATGTACTTG AATTCTATGC CTCGGGACTT GTCGGTGCTT TCAGTATGTG GTTTAAAAGC GACTGTGATA CTCCCCTTAA GGCCTTTCTC TACATAATAT ATTCTATTAT AAAAGCGAAT TAA
|
Protein sequence | MIKMSKSRQF TMDILLDAFW KLYRNYDIEK ITIKKITDTA GYNRITFYDY FKDIYDALDC LENKILSEIE LKIHKLFMAT GSATTDTFTE QVVFLFNEYR DFLMRFFSDS RNKSFEGKLQ NFIKSLLTKY SKVSLDFNNK YVLEFYASGL VGAFSMWFKS DCDTPLKAFL YIIYSIIKAN
|
| |