Gene Ccel_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1298 
Symbol 
ID7310086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1602832 
End bp1604265 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content41% 
IMG OID643608218 
Productglycoside hydrolase family 8 
Protein accessionYP_002505633 
Protein GI220928724 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.71564e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTTGCTTG CTTGCTTGTT TTGGCTATAA TTGTTACGAT TGTACCAATA 
AATATAGCAA GTGCAGAGAC AGGGGGATAT TACGCCACCG GGAACTACAG GAACGTCTTC
GTTGAAACAG GAAGGACAGA GGCTCAGGTA CAGGATAAAA TGAATACTAT GTTTGACAAG
TTCTTCAAAG GAGACACAAA CAATCAGAGG CTATTTTATG AGACCGGAAC CGACGAGGCA
TACATAAGAG ATACCGGAAA CGGTGATGTA CGTTCTGAAG GTATGTCCTA CGGTATGATG
GTTTGTGTGC AAATGGACAA AAAGAAGGAA TTTGATATGC TGTGGAAATG GGCTAGAAAC
CACATGTATC AAACCTCTGG TCAATTTAAG GGGTTTTTTG CATGGCAGTG TAACTATGAT
GGTGGTATAA TAGACAGCAC TCCTGCTTCT GACGGTGATG AATATTTTGC AATGGCTTTG
CTCTTTGCTG CACGCAGATG GGGAAATGGA ACAGGTATAT ACAACTATGA AGCAGAAGCA
CAGACTATAT TGGATGCAAT GCTTCACCAG TCAGACGATG GTGTTGGATA TAATATGATC
AATAAAAACG CAAATCAAGT TGTTTTCTGC CCAAGTGCAG GAAATTATGA TTTTACAGAT
CCGTCCTATC ATCTCCCGGC ATTTTATGAA TTATGGGCAA TGTGGGGACC TGAAAGAGAC
AGAGCTACTT GGAGTAAAGT AGCTGCTACT AGCAGGGAAT TCTTAAAAAA GTCTACTCAT
CCGACAACAG GACTTAACCC AGACTATGCA AATTTCGATG GTTCAGCAAA AGAAGTTTCA
TGGAGTTCAG GTCATGGTGA TTTCAGATTT GACGCATGGA GAGTTATTCA AAATTCTTGT
GTAGACTATG CTTGGTGGCA AAAAGACAGC TGGCCTGCAA CTACATTTGC ACCTAAAATT
CAGGCTTTCT TTAAAAACCA AGGGTTATCC ACCTACGGAA ACCAGTATAC ATTATCCGGT
TCAAAGCTGA GCAGTGATCA TTCTCCGGGA TTGGTAGCTA TGAATGCCGT ATCAGCTCTG
GCATCAGATG CAACAACTGC TAAGCCTTTT GTTGATGAAT TATGGAATAC TGCTGTTCCA
TCAGGTCAGT ACCGTTATTA TGACGGAATG CTTTATATGC TTGGAATGCT TAACGTAAGC
GGAAACTTCA AGATATGGGG TGCACCTACA GAGCCTTCGG TAACACGTGG TGATATTAAC
GATGACGGCA CTATAGATTC TGTTGACTTT GCATTGCTGA AGTCTTACCT GCTGGGTAGG
ACAACTACAT TGCCTAATAT GAAAGCAGCA GACTTAAATG GCGATGGTGT AGTGGATGCA
ATGGATTGGG CTGTACTTAG GCAGTATCTT TTAGGTATAA TAAAAACTCT ATAA
 
Protein sequence
MKKFFACLLV LAIIVTIVPI NIASAETGGY YATGNYRNVF VETGRTEAQV QDKMNTMFDK 
FFKGDTNNQR LFYETGTDEA YIRDTGNGDV RSEGMSYGMM VCVQMDKKKE FDMLWKWARN
HMYQTSGQFK GFFAWQCNYD GGIIDSTPAS DGDEYFAMAL LFAARRWGNG TGIYNYEAEA
QTILDAMLHQ SDDGVGYNMI NKNANQVVFC PSAGNYDFTD PSYHLPAFYE LWAMWGPERD
RATWSKVAAT SREFLKKSTH PTTGLNPDYA NFDGSAKEVS WSSGHGDFRF DAWRVIQNSC
VDYAWWQKDS WPATTFAPKI QAFFKNQGLS TYGNQYTLSG SKLSSDHSPG LVAMNAVSAL
ASDATTAKPF VDELWNTAVP SGQYRYYDGM LYMLGMLNVS GNFKIWGAPT EPSVTRGDIN
DDGTIDSVDF ALLKSYLLGR TTTLPNMKAA DLNGDGVVDA MDWAVLRQYL LGIIKTL