Gene Ccel_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1277 
SymbolhemC 
ID7310070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1580898 
End bp1581779 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content42% 
IMG OID643608198 
Productporphobilinogen deaminase 
Protein accessionYP_002505613 
Protein GI220928704 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.11617e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGAATAGG CAGCAGGGAC AGCAAGCTTG CAATTATACA ATCCGAGATG 
GTAATGGCTG CAATCAGAGA ATTTGACCCT GATATAGAGC TGGAATTGAT TACAATGAAA
ACTACGGGAG ATAAGATTCT GGACAAAACC CTTGATAAAA TAGGAGGAAA GGGCCTTTTC
GTCAAGGAGC TTGATTATGC ACTATACAAT AATGAGGTGG ATATAACCGT ACACAGTTAC
AAGGATATGC CTCTGGAGGA TAATCCGAAG TTGCCTGTTG TAGCTTTGTC AAAGCGTGAA
GACCCCAGAG ATGCCTTTGT TTTGCCTCAA GGTGAAATTG CAGAAAACAA TGAACCTATA
GGAAGTTCAA GTCAGAGGAG ACAGCTGCAG TTAAAAGCTT TATTTCCTAA TCGTAAAACA
GCCCCAATTC GTGGAAATGT ACAAACCCGC CTTAAAAAAC TTGACAGCGG TGAGTTTTCA
GCTATAGTAC TTGCTGCTGC GGGAATTAAG AGACTTGGCC TTGAAAGTCG TATCAGCAGA
TACTTTTCAG TTGATGAAAT TCTTCCAGCG GCAAGTCAGG GTATTATAGC AGTACAGGGC
AGAGCCGGAG AGAACTTTGA TTTTCTGAAG CTTTTCCATA GTGAGGAATC CCTATGTATT
TCACAGGCAG AAAGAACCTT CGTACGAGAA ATGAATGGCG GTTGCAGTAC ACCAATCGCG
GCTTATGCAA CCATTGTAGA AAGTGAAATT ATTCTCAAGG GCTTGTACCA TAATGAAGCT
ACGGGGGAAT CAAAGAAGGA ATGTGTTTCA GGAAGCAGGC AAAATCCTGT GGAATTAGGC
TATGAACTGG TAAAAAAGAT GGAAAGCTGC AGAAGGATTT AA
 
Protein sequence
MKKIRIGSRD SKLAIIQSEM VMAAIREFDP DIELELITMK TTGDKILDKT LDKIGGKGLF 
VKELDYALYN NEVDITVHSY KDMPLEDNPK LPVVALSKRE DPRDAFVLPQ GEIAENNEPI
GSSSQRRQLQ LKALFPNRKT APIRGNVQTR LKKLDSGEFS AIVLAAAGIK RLGLESRISR
YFSVDEILPA ASQGIIAVQG RAGENFDFLK LFHSEESLCI SQAERTFVRE MNGGCSTPIA
AYATIVESEI ILKGLYHNEA TGESKKECVS GSRQNPVELG YELVKKMESC RRI