Gene Ccel_1238 details

Gene Information

• Locus tag: Ccel_1238
• ID: 7310035
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 1522660
• End bp: 1526028
• Gene Length: 3369 bp
• Protein Length: 1122 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643608159
• Product: Carbohydrate binding family 6
• Protein accession: YP_002505574
• Protein GI: 220928665

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000137164
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGAA AGATTTTATC TGTTCTTTTG CTTGTCACAA TGACTACAGC ATTGTTTTCA 
GCTACACCGA TGAATACCGC TTCAGCCGCA AGTACGGACT TTGTACTAGA CGGAAACAAT 
ATCAAAGCGG GCAACATCAA CGGTCTCACA TTTAAGGGGT TCGGCGTCCT CAGTGGAAAC 
AGCTCAAGTG CACTGTTGAT GGATTACAAG TCGGAGCATC CTGAGAAATA TACAGAATTA 
CTGCAAATTC TGTTCGGTGG AAAAAATCCG ATTATGACAC ATGTCAAAAT TGAGATGGGT 
AATGACCGTA ACAACTCCAC CGGACCAGAT CCCTCAACAA TGCGTTGGGA AAATGAGACG 
GCTAATGTCA AAAGACACCC CGGATTTCAA CTTGCGGCTG ATGCCAAGAA GGTGAACCCC 
AATCTTAAAG TCAGCATATT ACGCTGGAAT GCCCCCGGTT GGGCAAATAG CAATGATAAG 
ATTTATACAT GGTATAAGAA CACCATATTA GCAGCATACC GTCAATATGG TTATATGATT 
GATTACGTAA ACCCGGGGGT CAACGAACAA ACACCGAATT TAACCTGGAC TAAGCAATAC 
GCCCAGCGTA TCAAAACAGA CAGTACAGGT TTTAACAATG CTGAAGAACG GGCACTTTAC 
AACAATATTA AGGTGGTGAT TTCCGACGAA GTTTCCGTCG GTTCCTTCGG GGATGATATG 
GTCAGTGATT CCACCCTTCG TGATGCCGTA TCTGTCGCTG CATATCACTA TAATACTGAT 
GACAATAGCT TGGGAAGTTT CAAACAGCTT GCCGAATCCT TTGACAAAGA GGTGTGGAAT 
AGTGAAGCAC AGGCCACTTT TAGTAATTCG TCCTTTCGTC CCAATAACAA TATGAAAGAT 
CCAACAGTAG CAGGAACCGG CATAGGAGGC ACAAATGGGC CACTGGAAAT GGGAAATACT 
GTTATAAAGG GGTTTGTAAA TTCAAGGAGG ACACATTTTA TCTATCAGCC AGTCATTGGG 
TCCTTCTATG AGGGTGGGCA GTACTCTTTT AAGGAATTGG TATCCGCACG TGATCCTTGG 
TCCGGGTGGA TTCACTATGA TGCCGGTCTT GTCATACTTC GGCATTTCAG TTGGTTTTCA 
AAGGCTGGCT GGGAAAATGA GAGTAATACC GCAGGGGTTT GGAGGGCTGT ACCTCAGGCG 
AGTTTCACAG GTGCGACGGG TACGAATCCT GTTAATGGGC GTAATGGCAC TCCCAGTTAT 
ATGACACTAG CTTCTCCGGA CAAGCATGAT TTTTCAACTA TCTTCATTAA CGATAGTGAA 
TATTCCAAAA CCTACACGTT TAAGACCATC AATATGGCTT ATTCGGGAAA CCCCTCGCTG 
GAAGTATGGG AAACTAGAGC AGCTGATAAG GGAGCATCTT TTAATAGTAA TTACATGAAG 
TACACTGGAA CGGTTTCCAC AAATAGCAGC GGAGTTTATA CAGTAAACGT AAAACCTTAT 
TCGATTGTTA CAGTTACAAC ATTAAGTAAC AGTGGAAAAG CAGAGTTCAA TACGCCTCTT 
CCGGTGGAGG GGGACCGCCC GGTTCTGGAT ACAGACAAGA CAGGTTCAAT GCAGGATACC 
AGGGATAATA TATTATATGC TGACAACTTT GATTATTCCA GCAAAACTGC CCCTGTCATA 
GCGGAGGGGG GACAAATCAC AGGAACCCAA AGTTATATAG ATTCCCGAGG AGGCTCAAAA 
AGTGCTATAC CACGTTATGC CAGCGACAGA AACGGTGCAT TTGAAGTGTA TCTTCCTGAC 
GGGTCCAGCA ACTATATCCT TCGCCAACAG GTGAATCAGT CAAGTATGGG GCTTGGGGGC 
ACATGGAATA ATGGTAATCC AATCACCGGC ATTGGAGATA ACCGTTGGAT GAACTATAAG 
GCAAGTGTGG ATGTTTCATT TGAACACAAC AGTACAGAGG GCGGTAACAA TTATGCTGCA 
ATCGGTGCCA GACAGCAGGG TGGTGAAAAT TCACACTACT TAAATGGTAC TCCTTATATA 
CTGAAATTCT GGTTTGACGG CGGTTGGTCG CTACTAGTAA ATGGAAGTTC CGTGGCAAAT 
GGTAATGTAG CAAGCGGCTC GGGTGGAGTG AAAATCAGTG GTTTTAATAC AGCTTATAAT 
GCATGGCATA ACATCTCTAT CATGGTTGCA GACAATAAGG TGACTGCGTA TCTGGACAAT 
ACCATCCTTT ATACCTATAC AGATACTACC CAAAGATTGT CCGGGCGTAT TGATCTGGCA 
AGCGGCTATT ACAATACTTG TTTTGACAAT TTGAAGGTTG AAACAATAGA CGGTTATGCA 
CCTTACTACT CTGAAATGCT GGACAATCTG GAAATGTACG ATTTGTCTTC TGTTTCTGCT 
ACAAAGCTTG TTTACGGCGG TTCTTGGGCA CATGAAAACG GCAAATCCAT GTACAATTAC 
CAACGATCAC TTTCCACGAG CCAGGGAATA GGTGCTACTA TTCAGTATTC ATTCACTGGC 
ACCGGGCTGG ACATTCTTGG AGCCAACAAC GGTTCTGCTA AGTTAGAGGT AACTGTTGAT 
GGAAGAGTTG TTAATTCCTC AGTGGGAACC ATGGTTTCAG GGAATTTACA CCAAAACTTT 
ACGCTTCACG GTCTTGAGTA CGGTAAGCAT ACGGTTTGTT TGAAGGTGTT AAGTGGTACT 
ATGGTTGTCG ATGCTGTTGG GGTTGTTGCA AACATAGCCG GTGCTTCGGA GATACCCGTT 
GAACAATCTG CGTATTCAAG GATAGAAGCA GAGAGCTACA GCAACCAGTC AGGAATCCAG 
ACAGAAACCT GTTCGGAAGG CGGAGAGGAT GTGGGCTTTG TTGAAAACGG CGACTATACT 
GTTTACAACA ATGTGGATTT CGGCGATGGT GTCGGAGGCT TCCAAGCAAG AGTAGCAAGT 
GCAACCAGTG GAGGCAATAT TGAGATCAGG CTTGACAGCT CTACCGGGAC TTTGATAGGA 
ACTTGTCCTG TTGCCGGAAC AGGGGATTGG CAGACTTATA CTGATGCAAA ATGTACTGTC 
AGCGGGGTAA CAGGAAAACA TGATGTATAC CTTGTATTTA AAGGAGATAG CGGATATTTA 
TTTAATCTTA ACTGGTTTAC ATTTAGTGAG AAAACTGTCA TAGGGAATTT GGGTGATATA 
AACTCGGACG GACAAGTAGA TGCAATAGAT TTACAGGTAT TGAAAAAGTA TCTTTTGCAA 
CTAGGGGAAA TTGGAGATAC GAAGCTGGCA GATTTGGATG CCAACGGAGA AATTAACGCA 
ATCGATTTTT CATTACTCAA ACAATTTTTA CTGGGTACTA TTATTAGTTT TCCGGGAGAA 
GCACTATAA 

 

Protein sequence

MKRKILSVLL LVTMTTALFS ATPMNTASAA STDFVLDGNN IKAGNINGLT FKGFGVLSGN 
SSSALLMDYK SEHPEKYTEL LQILFGGKNP IMTHVKIEMG NDRNNSTGPD PSTMRWENET 
ANVKRHPGFQ LAADAKKVNP NLKVSILRWN APGWANSNDK IYTWYKNTIL AAYRQYGYMI 
DYVNPGVNEQ TPNLTWTKQY AQRIKTDSTG FNNAEERALY NNIKVVISDE VSVGSFGDDM 
VSDSTLRDAV SVAAYHYNTD DNSLGSFKQL AESFDKEVWN SEAQATFSNS SFRPNNNMKD 
PTVAGTGIGG TNGPLEMGNT VIKGFVNSRR THFIYQPVIG SFYEGGQYSF KELVSARDPW 
SGWIHYDAGL VILRHFSWFS KAGWENESNT AGVWRAVPQA SFTGATGTNP VNGRNGTPSY 
MTLASPDKHD FSTIFINDSE YSKTYTFKTI NMAYSGNPSL EVWETRAADK GASFNSNYMK 
YTGTVSTNSS GVYTVNVKPY SIVTVTTLSN SGKAEFNTPL PVEGDRPVLD TDKTGSMQDT 
RDNILYADNF DYSSKTAPVI AEGGQITGTQ SYIDSRGGSK SAIPRYASDR NGAFEVYLPD 
GSSNYILRQQ VNQSSMGLGG TWNNGNPITG IGDNRWMNYK ASVDVSFEHN STEGGNNYAA 
IGARQQGGEN SHYLNGTPYI LKFWFDGGWS LLVNGSSVAN GNVASGSGGV KISGFNTAYN 
AWHNISIMVA DNKVTAYLDN TILYTYTDTT QRLSGRIDLA SGYYNTCFDN LKVETIDGYA 
PYYSEMLDNL EMYDLSSVSA TKLVYGGSWA HENGKSMYNY QRSLSTSQGI GATIQYSFTG 
TGLDILGANN GSAKLEVTVD GRVVNSSVGT MVSGNLHQNF TLHGLEYGKH TVCLKVLSGT 
MVVDAVGVVA NIAGASEIPV EQSAYSRIEA ESYSNQSGIQ TETCSEGGED VGFVENGDYT 
VYNNVDFGDG VGGFQARVAS ATSGGNIEIR LDSSTGTLIG TCPVAGTGDW QTYTDAKCTV 
SGVTGKHDVY LVFKGDSGYL FNLNWFTFSE KTVIGNLGDI NSDGQVDAID LQVLKKYLLQ 
LGEIGDTKLA DLDANGEINA IDFSLLKQFL LGTIISFPGE AL