Gene Ccel_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1224 
Symbol 
ID7310021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1498348 
End bp1499880 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content38% 
IMG OID643608145 
ProductABC transporter related 
Protein accessionYP_002505560 
Protein GI220928651 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGAATG GAAATCGTGA AGTTCTTAAA ATGAAAAATA TTTGCAAGAC TTTTCCGGGA 
GTTACAGCAT TATCAAATGT GGATTTTACA TTGCGTTCAG GTGAGATTCA TGCTCTGATG
GGTGAGAATG GTGCCGGGAA AAGTACCTTG ATAAAAGTTT TAACGGGTGT TGAAGAGTTT
GAATCAGGTC AAATAATTAT AGATGGATTA AATTATCCTG TTATAAATAA ATCTCCTCAG
GAAGCCCAAG TAAATGGAAT AAGTACAGTA TACCAGGAGA TAAATTTATG TCCGAATCTT
TCTGTAGCCG AGAATATTTT TATAGGAAGA GAGCTTAAAA AGGCAGGACG TATTGATTGG
AAGGCAATAA ATAAAAGAGC AAAAGAGATT TTATTGAATT TCAATATGGA TATTGATGTT
ACAAAATCTT TGGACAATTA TTCGGTGGCT ATGCAGCAGA TGGTTGCAAT TGCCAGAGCA
ATTGACATTT CCTCTAAAGT ACTTATATTG GATGAACCCA CATCTAGCTT AGATGAAAAT
GAGGTTGAAA AGCTGTTTGA GGTAATGAGA AAATTAAAAT CTCAGGGAAC AGGTATTGTA
TTTGTAACCC ACTTTCTTGA ACAGGTATAT GCAGTATGTG ACAGGATTAC TGTATTGAGA
AACGGTAGTT TGGTAGGCGA ATATGAGGTT GAAAAGCTGC CAAGAGTTCA ATTGGTTGCT
AAAATGATGG GTAAGGAATT TGATGATTTA GCCCTTATAA AAAAAGCAGC AAAAGAACAA
GAAATAAAAG AAACAAAAGA AACCATTATT TGTGCAAAAG AATTGGGACA TACCGGGACT
ATCAAACCAT TTAATCTGGA AATAAGAAAA GGCGAAGTAA TAGGTCTTGC AGGCCTTTTA
GGCTCTGGCC GCTCCGAGCT GGCAAGAGTA ATATACGGTG CTGATAAGGC AGATTGCGGA
GAACTTGAAG TTAACGGACA AGAACGCAGC TTTAAATCAC CTATAGATTC AATGAAAGCA
GGAATGGCTT TTTGTCCTGA AAACAGGAAG GAAGAAGGAA TTATAGCCGA TTTATCTGTA
AGAGAAAATA TGATTCTTGC TCTCCAAGCA AAGAGAGGTA TGTTTAAGCT GATAAGTAAA
AAGGAACAGG AGGAGCTGAC AGACAAATTT ATTAACATGC TTCAGATTAA AACAGCGGAT
CGTGAAACTC CCATAAAGCA GCTCAGCGGC GGTAACCAGC AAAAGGTAAT ACTTGGCAGA
TGGCTTATGA CTGAACCAGA TTTTTTGATT CTTGACGAAC CCACCAGAGG TATTGATGTA
GGTACCAAAA CAGAGATACA GAAGCTTGTT GTTGACTTTG CGGGCAAAGG AATGACAGTG
ATGTTTATTT CTTCGGAAAT AGAGGAGATG CTGCGTACAG TTAATAGAAT GGCAGTTCTC
CGCGATGGTA AAAAAGTAGG GGAGCTTGAC GAAAATGAGC TGTCTCAGGA ATTGGTTATG
AAGGTTATCG CAGGGGGTGA TGCTAATGTA TAG
 
Protein sequence
MENGNREVLK MKNICKTFPG VTALSNVDFT LRSGEIHALM GENGAGKSTL IKVLTGVEEF 
ESGQIIIDGL NYPVINKSPQ EAQVNGISTV YQEINLCPNL SVAENIFIGR ELKKAGRIDW
KAINKRAKEI LLNFNMDIDV TKSLDNYSVA MQQMVAIARA IDISSKVLIL DEPTSSLDEN
EVEKLFEVMR KLKSQGTGIV FVTHFLEQVY AVCDRITVLR NGSLVGEYEV EKLPRVQLVA
KMMGKEFDDL ALIKKAAKEQ EIKETKETII CAKELGHTGT IKPFNLEIRK GEVIGLAGLL
GSGRSELARV IYGADKADCG ELEVNGQERS FKSPIDSMKA GMAFCPENRK EEGIIADLSV
RENMILALQA KRGMFKLISK KEQEELTDKF INMLQIKTAD RETPIKQLSG GNQQKVILGR
WLMTEPDFLI LDEPTRGIDV GTKTEIQKLV VDFAGKGMTV MFISSEIEEM LRTVNRMAVL
RDGKKVGELD ENELSQELVM KVIAGGDANV