Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1182 |
Symbol | |
ID | 7309986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1446649 |
End bp | 1447644 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643608104 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_002505519 |
Protein GI | 220928610 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00505251 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATGG GAGATTTTTT GCTGTCTCCG GCAGTCGGAG GTACAGTGAT GACAGCAGCT GTGGGGACAG CAGCGGTTTC AATAAAAAAA GTAAGGGACA TGGACGAGAA GAAAATCTCT TTAATGGGGG TAATGTCCGC TTTTGTTTTC GCAGCACAAA TGATTAATTT TACAATACCG GGGACAGGGT CAAGTGGTCA TCTGGCAGGG GCATTAATGC TTTCAATCCT GCTGGGGCCG TATGCGGGAT TTTTGTCAAT AGCGGCGATA CTTCTTATAC AGGCAATGTT CTTTGCTGAC GGAGGACTGC TTGCCTATGG CTGCAATGTA ATAAATATTG GTTTTTTTGC ATGTTTTATT GCATACCCAC TGATATACCG TACTGTAACT AAAAAAGGAC TGACCAGAAC TAGATTAATG ACAGGAAGTA TTCTGGCAAG TGTAGCGGCA CTTCAGATGG GTGCTTTCAG TGTAGTAATT GAGACACTTC TTTCAGGAAA AACAGAGCTG CCCTTTGCAC AGTTTGCACT TGCTATGCAG GGAATCCATC TTGCAATAGG AGCAGTGGAG GGCGTGGTTA CGGCTGTGGT AGTATCCTTT GTTTGGAAGG TTAGACCTGA TATTATTAAT GCCGAACCGT CTGATATCAA AAAGAAGGGC TATAGGTCAA TAATTGCAGG ATTTCTAGTG GCTGCTGCAC TTCTGGCGGG AGGAGTTTCC CTGTTTGCAT CAGCTAATCC TGACGGTTTG GAATGGTCCA TAGGCAAGGT AGCAGGAGAA AAGGAAATAA AGGGAGAAAC CCAAGTACAC AAATCTCTTG AAAAAGCACA GCAGGATATT GCTTTATTGC CTGATTACAG TTTCAAGGAA CAGGAAAATG CAAATGAATC CGCGGGAACG GTTGTTTCAG GACTTGTCGG CTCTGGAATT ACAATAGGGC TTGTAGTATT GGCAGGTTAT CTTATAAAGC TGATGAAGCG GAAGAAAGCT AATTAA
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Protein sequence | MHMGDFLLSP AVGGTVMTAA VGTAAVSIKK VRDMDEKKIS LMGVMSAFVF AAQMINFTIP GTGSSGHLAG ALMLSILLGP YAGFLSIAAI LLIQAMFFAD GGLLAYGCNV INIGFFACFI AYPLIYRTVT KKGLTRTRLM TGSILASVAA LQMGAFSVVI ETLLSGKTEL PFAQFALAMQ GIHLAIGAVE GVVTAVVVSF VWKVRPDIIN AEPSDIKKKG YRSIIAGFLV AAALLAGGVS LFASANPDGL EWSIGKVAGE KEIKGETQVH KSLEKAQQDI ALLPDYSFKE QENANESAGT VVSGLVGSGI TIGLVVLAGY LIKLMKRKKA N
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