| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1181 |
|---|
| Symbol | |
|---|
| ID | 7309985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1444909 |
|---|
| End bp | 1446465 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643608103 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002505518 |
|---|
| Protein GI | 220928609 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00389861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAA TAATGTATTT AATTAAAAGA GCTTATATAA ATAAAATTAA GCGTGCATTT
AAAAGTATTC CTTCAGCTAT ACTTACTGTG TTGGGTGTAG TTGGATTTTT ATTTGTTTTT
ATCTCGTCGT TTAAAATGAA AAAAGCCCCG TTTCAGAGTG CATCATCTGA AACGATTATT
GCGGCAGTAG TCCTTTTAAT TGGAGTCTTA TTATACAATT CATTCCTTTC CAGAGATACT
GGAATATTGA CAATGGCGGA TGCAAATTTC CTTTTTACAG GGCCCTTTGA GAAAAGACAG
GTACTTCTTT ACCTGTTGGT TTCTGTGGCA CCCGCTTCAC TTATGATTGG TTTCTTCATG
TGTTTTTATC TTCCTTTTTT AATGGGACCG GCATTAAGCT TTCCTAAATA TATAATAACA
CTTGTTATTA TAAGTCTTTT TCTTGGAGTA GTTTTCCTCT CTTACTACTA CATATACATA
GTTGATTCGG AGCATACGGG TTTCAGGAAA AAATCAAAGA CGGTTTTCTG GGCTTTTATA
GGTGTGCTTG CAGTTATCTT TGCAGTTATG CTATTTAATA ATAATTTTGA ATTAAGGATA
ACAGTCCAAA AGTATTTTGG AAGCTCATGG TATAACTGGG TACCTCTTTT CGGCTGGACA
AAATGGGCGA TAAGTTCTTT GTTAGGAGGA AATATGCTGA CAGGATTTAT CCCACCTGTA
TGTTTGCTTC TGGCTTCAAA TGCACTGTTA GGTATTTTAC TGTACAATGT AAAAGCTGAT
TTTTATGAAA AAACTTTAGA AGACTCAGTC AGTCTCCAGA AAATAATGGA TGATATTAAG
ACATCAGGTA AAGCAGATTC ACTTGCCTTC TCAAAGGTGA AGAAAAGGGC AGTTTCTGTA
AAATTTAGAA CAGGAGCTTC TGCAATATAT TCAAAACAGA TGCTTGAAAG CAGGAAAATG
GGAGTATTAT CAAATTACAG AGAATTATTA ATTGGACTGT TCTATGTAGG GTTTGGTTTG
ATTTTTGGCT TAAATTTCAA CTTTGTATTC ACCATGGTAA GTTTCGGAGC CTTGTCCATG
TCTCTTAACG ATTCTTGGCA TAGGGATTTT AAAAAACCTT ATGTATTTCT TATTCCGGAA
AACTCATTCA ATAAAGTAAT ATATTCCGTT TTGCCGGGGT TAGTTAAAAC TATAATAAAC
GGTAGTATAT CTATAACCGT TGCTGCTATA GCGTACAAAC TCAGTCCGTC GGCGTGGAGT
AGTTATATAC TGGTATTTTT GAGTTTTGCC TTACTTTTCG TTTTTGCAGA AGTATTCACA
TACAGGATAA TAGGATCGAG TTCCAATGCG ATGGTGGTTA CCATGCTCAG GATGTTGTTC
GTAATAGCTA CATGTGTACC GGCGTTTATA ATATTGATTA TAATATCGGT TCTTTCAAAC
GGTGTACCAA ACCTGACACA AATAGCTATA TGTATGTTAG CTGTAAACAT GGTATTTTCC
GTACTGTTGG CATACCTCAG CAAGGGTATT TTTGAACAGA GTGAACTTAT GGAATAA
|
|---|
| Protein sequence | MQAIMYLIKR AYINKIKRAF KSIPSAILTV LGVVGFLFVF ISSFKMKKAP FQSASSETII
AAVVLLIGVL LYNSFLSRDT GILTMADANF LFTGPFEKRQ VLLYLLVSVA PASLMIGFFM
CFYLPFLMGP ALSFPKYIIT LVIISLFLGV VFLSYYYIYI VDSEHTGFRK KSKTVFWAFI
GVLAVIFAVM LFNNNFELRI TVQKYFGSSW YNWVPLFGWT KWAISSLLGG NMLTGFIPPV
CLLLASNALL GILLYNVKAD FYEKTLEDSV SLQKIMDDIK TSGKADSLAF SKVKKRAVSV
KFRTGASAIY SKQMLESRKM GVLSNYRELL IGLFYVGFGL IFGLNFNFVF TMVSFGALSM
SLNDSWHRDF KKPYVFLIPE NSFNKVIYSV LPGLVKTIIN GSISITVAAI AYKLSPSAWS
SYILVFLSFA LLFVFAEVFT YRIIGSSSNA MVVTMLRMLF VIATCVPAFI ILIIISVLSN
GVPNLTQIAI CMLAVNMVFS VLLAYLSKGI FEQSELME
|
|---|
| |