Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1080 |
Symbol | |
ID | 7309895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1334602 |
End bp | 1335555 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643608004 |
Product | PfkB domain protein |
Protein accession | YP_002505419 |
Protein GI | 220928510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATATG ATGTTGTAAT AAACGGATAT ATCAGCTTGG ACAGAATTAT TAAAACAACA ACTCCTTTAA GATACGGATA TACTTCACTG GTTGAGAACA GTGACAATGC CAAGATTCAA TATGGAGGAT GTTCAACGAA TATCGCCTAT CTTATGGCAA AGCTTAATAT GAAGTCTCTT CCTATGATAA GAGTAGGGGC AGATGACTAC AGGGAGACAG GATTTTATGA TTATCTAAAA AATGCCGGAG TGTGTATGGA TGCGGTTGAG ATAGTTCCTG ATGAAACAAC TTCAAACTGT TACCTTATAG CTGATTCAGA AAATAACCAT GTTACGATTT TTTACCCTGG AGCTATGGAC AAAAAGTATG CAAAAGGGAT GAATCCGGAG TTTTTCGCAC AGTCAAAGCT TGGTGTTATG ACTGTGGGAT CATATGAAGA TAATCTTGAA TTTTACAGAC AGTGTATGGC TAAAAAAGTT CCTCTGGTTT TTGGGATGAA ATGTGATTTT GATGCTTTCC CTGAAAAATT CTTTAAAGAG GTTCTCTCTT CCAGCAGTAT AATTTTCTGC AATGAAGGAG AACAAGGGGA GATACAGAGG GTATTTGGCC TTAATGACAT AAGGGAGCTG TTTGATAACA CAGCAGCACA GATTATAGTA ACAACACTGG GCAAGAAGGG AAGCGTTTAT TACCAAAAGA CAGAAAATGG TATTTTATCC CATAGAATAG CAGCCGCTGA GTTTGGTAGT GTGGTTGATA CTACTGGTTC AGGTGATGCA TTTATGGCGG GCTTCCTGTA TGGATATTTA AAGGGCAGAA GCATAAAGGA CTGCTGTAGC CTTGGAAGTG TACTTTCATC CTTTATTATT GAAAAGGTTG GGTGTACGAC TAATGCTCCT TCTGAACAGG AATTTCTGGA GCGTTTCGAA AAATTTATAG AAGAGGAAGT GTGA
|
Protein sequence | MKYDVVINGY ISLDRIIKTT TPLRYGYTSL VENSDNAKIQ YGGCSTNIAY LMAKLNMKSL PMIRVGADDY RETGFYDYLK NAGVCMDAVE IVPDETTSNC YLIADSENNH VTIFYPGAMD KKYAKGMNPE FFAQSKLGVM TVGSYEDNLE FYRQCMAKKV PLVFGMKCDF DAFPEKFFKE VLSSSSIIFC NEGEQGEIQR VFGLNDIREL FDNTAAQIIV TTLGKKGSVY YQKTENGILS HRIAAAEFGS VVDTTGSGDA FMAGFLYGYL KGRSIKDCCS LGSVLSSFII EKVGCTTNAP SEQEFLERFE KFIEEEV
|
| |