Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1050 |
Symbol | |
ID | 7309869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1304447 |
End bp | 1306555 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643607975 |
Product | hypothetical protein |
Protein accession | YP_002505390 |
Protein GI | 220928481 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGTA AACAAATACA AGAAAAACCT TTAAACCGCA TAGAAGACAA TGCGGATGAT TCAAGCATAT TTAACAATTT TCCTGAGGAA ATCGAACATC TTGAGGAAAT TAAAGAAAAA TTGAATGATG CTTTAAAAAA CTATAGTAAA TCAGTCAAAC AGTATGATGA GCAGTATATG AATTCTAAAC GATATCTTGC AGATTATCGC AGTGAAATAG ACCCAAAGGA AATATTCCAA AATGAGATCT CTATGAAACA GATTGAAAGA GCAGGAACTC TTGCTGTAAA AATGAGGGAA AGAATTAACA AGCTGATAGA ATCTCCATAC TTTGCAAGGA TCGACTTTAG TGAAGATGAA AGCGAGCTCC CCTCTGTTTT CTACATCGGC AGATTTTCCT TTTCTGATGC AGATCAGTCA AATATTCTGA TTTTTGACTG GCGGACTCCT GTCTCAAGCA TGTTTTATGA TTGTGAATTG GGTCAAGCAG GATATGATGC TCCAATTGGA AGAGTTAATG GGAATCTGAC CCGTAAACGT CAATTAAAAA TAGCCCAGGG GCAAATGAAA TATGTTTTAG AAAGCTCAAT AAACATTCAG GATGATGTAC TGCAAAGGGA GCTAAGCCAT ACATCAGATG AAAAAATGAA GACAATAATC TCTACCATAC AAAGAGAACA GAATCAGATT ATCAGAAATG AGCAAGCAGA AACTCTTATT ATCCAGGGAG TTGCCGGTTC TGGTAAAACG TCCATCGCAC TACACCGAAT AGCGTATTTA CTGTATCGGT TCAAGGAAAC CTTGTCTGCT CAAAATGTAG TTATACTATC CCCAAATAAG GTTTTCGCAG ACTACATTTC CAATGTATTG CCTGAACTAG GTGAAGAACC AATCTTCGAA ATGAGTTTTG CTGATGTTGC CGAAATACAA TTGGATGGAA TAATTAAATT TGAGCCTGAC AAAGACCCTC TCGAAACAAA TGATCCTGCT TGGGCAGAAA GAGTAAAATT TAAATCTGGA TTTGACTTTG TAAAAATGAT GGATCAATAT CTGGAATATG CAGCAGCTGA ATATTTCGAA CCCACTGATT ATGAATTTGC TCATTTTAAA GCTGACAGGG AATGGATTCT GTCACGGTAC AATGCATATA AAAACTATCC TGTCAAGAAA CGGTTGTTTG AGGTATCGTC AGATATTTAC GATAAATTCC AAACTGAAAA TCTTATGGGA GATGAATTGC CAAAGCCAAA AGCAGTTCTA AAGAAATTAG GTGATATGTT TAAGATTAAA AACACCTTAG CTCTTTATAA AGACTTTTAT AAGACAATAA AATTACCTGA GAAATTCGTA ATGCCTGATA AGAAATTACT GGAGTGGGCC GATGTTTATC CTTTTATGTA CTTTCATTCT GCCTTTGAGG GTTTAAAGGA AAACCAACTA ATAAAGCATG TTATCATTGA TGAAATGCAG GATTACACAC CTGCTCAATA TATTGTTATA AATAAGCTCT TTAAATGCAA AAAAACAATA CTTGGGGATT TTGGGCAGTC TCTTAATCCC AATCACCTTC ATTCCCTCGA TGATCTCAAA AAAGTTTACG AAGGTGTCAA TTACGTGGAA CTGAATAAGA GCTACCGTTC AACATACGAA ATTATTAATT TTGCAAAGCT GATACAAAAT GTTGCAAAGT TGGAACCGAT AGAACGTCAC GGAGATGTAC CCGAACTTAT ATTGTGCAAT GACACACAGG ATGAGCTTAT AAAAATAAAA GATAAAATTG AAGCTTTTCA GCAAAGCGGC AATGTAACAC TGGGAATTAT CCTGAAAACA AATAGCATGG CAGCTTCGCT ATACGATACT TTATCCAAGG ATTACGATAT CCAGTTAATT ACACCTGACA GCCTTCAGTT TGTTAATGGA ATTACAGTTA CCTCTATCCA AATGTCAAAA GGACTTGAAT TTGATGAGGT AATCATCCCT TCCGCAAACA GCGAAACCTA TTGTACTGAT TATGACCGTA AACTTTTGTA TATTGCCTGT ACTCGTGCCA TGCACAAGTT ATCACTTCTA TATACCGGAA GTTTAACCGA ATTAATAGAA AATAAATAA
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Protein sequence | MNGKQIQEKP LNRIEDNADD SSIFNNFPEE IEHLEEIKEK LNDALKNYSK SVKQYDEQYM NSKRYLADYR SEIDPKEIFQ NEISMKQIER AGTLAVKMRE RINKLIESPY FARIDFSEDE SELPSVFYIG RFSFSDADQS NILIFDWRTP VSSMFYDCEL GQAGYDAPIG RVNGNLTRKR QLKIAQGQMK YVLESSINIQ DDVLQRELSH TSDEKMKTII STIQREQNQI IRNEQAETLI IQGVAGSGKT SIALHRIAYL LYRFKETLSA QNVVILSPNK VFADYISNVL PELGEEPIFE MSFADVAEIQ LDGIIKFEPD KDPLETNDPA WAERVKFKSG FDFVKMMDQY LEYAAAEYFE PTDYEFAHFK ADREWILSRY NAYKNYPVKK RLFEVSSDIY DKFQTENLMG DELPKPKAVL KKLGDMFKIK NTLALYKDFY KTIKLPEKFV MPDKKLLEWA DVYPFMYFHS AFEGLKENQL IKHVIIDEMQ DYTPAQYIVI NKLFKCKKTI LGDFGQSLNP NHLHSLDDLK KVYEGVNYVE LNKSYRSTYE IINFAKLIQN VAKLEPIERH GDVPELILCN DTQDELIKIK DKIEAFQQSG NVTLGIILKT NSMAASLYDT LSKDYDIQLI TPDSLQFVNG ITVTSIQMSK GLEFDEVIIP SANSETYCTD YDRKLLYIAC TRAMHKLSLL YTGSLTELIE NK
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