| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1028 |
|---|
| Symbol | |
|---|
| ID | 7309851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1280425 |
|---|
| End bp | 1281096 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643607955 |
|---|
| Product | deoxyribose-phosphate aldolase |
|---|
| Protein accession | YP_002505370 |
|---|
| Protein GI | 220928461 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0160558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACG ATAAAAAGGT ATTTGCTAAA TATTTTGATC ATACAATTTT AAAAGCAGAT
GCTACCGAAG AACAGGTAAT AAATCTATGT AATGAGGCAT TAGAGTACGA ATTTGCATCA
ATATGTGTAA ATTCATGTCA TACAAAACTA GTTTCAGATA AATTAAAAGG TTCTAATGTA
AAAACCTGTG TTGTAGTGGG ATTTCCACTA GGAGCAATGT CTCCGCGTTC TAAAGCATTC
GAAACCAAAG ACGCGGTTGA AAGTGGTGCA CAGGAAATTG ACATGGTAAT AAATGTAGGT
GCTTTAAAAG CAAAGAATTA TGATTATGTT GAGAATGATA TAAAAGGTGT TGTAGAAGCT
GCGGGGAAAA AGGCAATAGT AAAAGTAATT ATTGAAACAT GCCTTCTTAC AGATGATGAG
AAAGTAAAAG CATGTGAACT TTCAAAGAAA GCCGGTGCTG ATTTTGTTAA AACTTCTACA
GGTTTCAGTA CAGGTGGTGC CACAGAAGAA GATGTAGCTT TAATGAGAAA AACCGTGGGA
GAAAGTGTGG AAGTGAAAGC TTCCGGTGGA ATCAGAGATT ATGAAACAGC GGTAAAAATG
ATTAAGGCCG GTGCATCTAG AATTGGAGCA AGTGCATCTG TAGGAATTGT TAAGAATAGT
CAAAAATTAT AA
|
|---|
| Protein sequence | MVNDKKVFAK YFDHTILKAD ATEEQVINLC NEALEYEFAS ICVNSCHTKL VSDKLKGSNV
KTCVVVGFPL GAMSPRSKAF ETKDAVESGA QEIDMVINVG ALKAKNYDYV ENDIKGVVEA
AGKKAIVKVI IETCLLTDDE KVKACELSKK AGADFVKTST GFSTGGATEE DVALMRKTVG
ESVEVKASGG IRDYETAVKM IKAGASRIGA SASVGIVKNS QKL
|
|---|
| |